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Putative Escherichia fergusonii RHB41-C20 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
Sequence length: | GenBank #: | |
Chromosome: | 4,690,654 bp | CP056961 |
plasmid pRHB41-C20_2: | 106,982 bp | CP056962 |
plasmid pRHB41-C20_3: | 98,816 bp | CP056963 |
REBASE acronym: Efe41C20
Org_num: 43223
All begin HV012_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
17400 | IS1 family transposase | |||
17405 | R | EfeC23ORF13600P (100% identity) | Efe41C20ORF17415P | |
17410 | S | S.Efe41C15ORF17405P (100% identity) | S.Efe41C20ORF17415P | |
17415 | M | M.Efe41C15ORF17405P (100% identity) | M.Efe41C20ORF17415P | |
17420 | IS1 family transposase | |||
plasmid pRHB41-C20_2 | ||||
22750 | IS3 family transposase | |||
22755 | R | Efe41C15ORF22765P (100% identity) | Efe41C20ORF22770P | |
22760 | DUF4268 domain-containing protein | |||
22765 | S | S.Efe41C15ORF22765P (100% identity) | S.Efe41C20ORF22770P | |
22770 | M | M.Efe41C15ORF22765P (100% identity) | M.Efe41C20ORF22770P | |
22775 | SPFH/Band 7/PHB domain protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1360 | bifunctional isocitrate dehydrogenase | |||
1365 | M | M.Efe41C15ORF1365P (100% identity) | M.Efe41C20ORF1365P | |
1370 | glyoxylate bypass operon transcriptional | |||
1655 | PerC family transcriptional regulator | |||
1660 | M | M.Efe41C15ORF1660P (100% identity) | GATC | M.Efe41C20ORF1660P |
1665 | LexA family transcriptional regulator | |||
1695 | 67 aa hypothetical protein | |||
1700 | M | M.Sdy9764ORFEP (100% identity) | M.Efe41C20ORF1700P | |
1705 | phage lysis protein EssD | |||
3275 | helix-turn-helix domain-containing protein | |||
3280 | M | M.Sen24770ORF310P (100% identity) | GATC | M.Efe41C20ORF3280P |
3285 | RusA family crossover junction | |||
6610 | DUF1382 family protein | |||
6615 | M | M.Efe41C15ORF6610P (100% identity) | M.Efe41C20ORF6615P | |
6620 | PerC family transcriptional regulator | |||
8855 | recombination protein NinB | |||
8860 | M | M.SflN97ORF15810P (100% identity) | GATC | M.Efe41C20ORF8860P |
8865 | NinE family protein | |||
12660 | 150 aa hypothetical protein | |||
12665 | M | M.Efe41C15ORF12655P (100% identity) | M.Efe41C20ORF12665P | |
12670 | monooxygenase | |||
19905 | DNA-binding transcriptional regulator Fis | |||
19910 | M | M.Efe41C15ORF19905P (100% identity) | M.Efe41C20ORF19910P | |
19915 | DUF2556 family protein | |||
20430 | ribulose-phosphate 3-epimerase | |||
20435 | M | M.EfeTDamP (100% identity) | M.Efe41C20DamP | |
20440 | cell division protein DamX | |||
plasmid pRHB41-C20_2 | ||||
23240 | 76 aa hypothetical protein | |||
23245 | M | M.SphSSU5ORF88P (96% identity) | M.Efe41C20ORF23245P | |
23250 | 290 aa hypothetical protein | |||
plasmid pRHB41-C20_3 | ||||
23830 | SPFH/Band 7/PHB domain protein | |||
23845 | M | M.Sen9860ORF25540P (100% identity) | M.Efe41C20ORF23845P | |
23850 | recombination-associated protein RdgC | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
19235 | 100 aa hypothetical protein | |||
19240 | R | Efe41C15ORF19245BP (100% identity) | Efe41C20ORF19255BP | |
19245 | IS1 family transposase | |||
19250 | R | Efe41C15ORF19245AP (100% identity) | Efe41C20ORF19255AP | |
19255 | M | M.Efe41C15ORF19245P (100% identity) | M.Efe41C20ORF19255P | |
19260 | DEAD/DEAH box helicase family protein |