Escherichia fergusonii RHB42-C13 |
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Putative Escherichia fergusonii RHB42-C13 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,542,590 bp | CP056936 |
| plasmid pRHB42-C13_2: | 114,980 bp | CP056937 |
REBASE acronym: Efe42C13
Org_num: 43225
All begin HV020_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17540 | Fic family protein | |||
| 17545 | R | EfeEF02ORF206830P (100% identity) | Efe42C13ORF17550P | |
| 17550 | M | M.EfeEF02ORF206830P (100% identity) | M.Efe42C13ORF17550P | |
| 17555 | S | S.EfeEF02ORF206830P (100% identity) | S.Efe42C13ORF17550P | |
| 17560 | endoribonuclease SymE | |||
| 17640 | DUF4942 domain-containing protein | |||
| 17645 | M | M.EfeEF02ORF206740P (100% identity) | M.Efe42C13ORF17645P | |
| 17650 | S | S.Efe42C24ORF17940P (100% identity) | S.Efe42C13ORF17645P | |
| 17655 | R | EfeEF02ORF206740P (100% identity) | Efe42C13ORF17645P | |
| 17665 | NADPH-dependent aldehyde reductase Ahr | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 735 | bifunctional isocitrate dehydrogenase | |||
| 740 | M | M.EfeC18ORF680P (100% identity) | M.Efe42C13ORF740P | |
| 745 | glyoxylate bypass operon transcriptional | |||
| 2455 | helix-turn-helix domain-containing protein | |||
| 2460 | M | M.Efe42C24ORF2460P (100% identity) | GATC | M.Efe42C13ORF2460P |
| 2465 | RusA family crossover junction | |||
| 15920 | DUF1317 family protein | |||
| 15925 | M | M.EfeC13ORF14690P (100% identity) | M.Efe42C13ORF15925P | |
| 15930 | 93 aa hypothetical protein | |||
| 17620 | HNH endonuclease | |||
| 17625 | R | Efe42C24ORF17920P (100% identity) | Efe42C13ORF17625P | |
| 17630 | McrC family protein | |||
| 18300 | DNA-binding transcriptional regulator Fis | |||
| 18305 | M | M.EfeTORF37040P (100% identity) | M.Efe42C13ORF18305P | |
| 18310 | DUF2556 family protein | |||
| 18825 | ribulose-phosphate 3-epimerase | |||
| 18830 | M | M.EfeTDamP (100% identity) | M.Efe42C13DamP | |
| 18835 | cell division protein DamX | |||
| plasmid pRHB42-C13_2 | ||||
| 22000 | 103 aa hypothetical protein | |||
| 22005 | M | M.Efe42C24ORF22300P (100% identity) | SAY | M.Efe42C13ORF22005P |
| 22010 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17560 | endoribonuclease SymE | |||
| 17565 | R | EfeTMcrBP (100% identity) | Efe42C13McrB2P | |
| 17570 | R | EfeMcrCP (100% identity) | Efe42C13McrC2P | |
| 17625 | HNH endonuclease | |||
| 17630 | R | EfeEF02McrC2P (100% identity) | Efe42C13McrCP | |
| 17635 | R | EfeEF02McrB2P (100% identity) | Efe42C13McrBP | |
| 17640 | DUF4942 domain-containing protein | |||