Escherichia fergusonii RHB42-C24 |
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Putative Escherichia fergusonii RHB42-C24 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,600,545 bp | CP056916 |
| plasmid pRHB42-C24_2: | 114,980 bp | CP056917 |
REBASE acronym: Efe42C24
Org_num: 43226
All begin HV025_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17835 | Fic family protein | |||
| 17840 | R | EfeEF02ORF206830P (100% identity) | Efe42C24ORF17845P | |
| 17845 | M | M.EfeEF02ORF206830P (100% identity) | M.Efe42C24ORF17845P | |
| 17850 | S | S.EfeEF02ORF206830P (100% identity) | S.Efe42C24ORF17845P | |
| 17855 | endoribonuclease SymE | |||
| 17935 | DUF4942 domain-containing protein | |||
| 17940 | M | M.EfeEF02ORF206740P (100% identity) | M.Efe42C24ORF17940P | |
| 17945 | S | S.Efe42C13ORF17645P (100% identity) | S.Efe42C24ORF17940P | |
| 17950 | R | EfeEF02ORF206740P (100% identity) | Efe42C24ORF17940P | |
| 17960 | NADPH-dependent aldehyde reductase Ahr | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 735 | bifunctional isocitrate dehydrogenase | |||
| 740 | M | M.EfeC18ORF680P (100% identity) | M.Efe42C24ORF740P | |
| 745 | glyoxylate bypass operon transcriptional | |||
| 2455 | helix-turn-helix domain-containing protein | |||
| 2460 | M | M.Efe42C13ORF2460P (100% identity) | GATC | M.Efe42C24ORF2460P |
| 2465 | RusA family crossover junction | |||
| 15920 | DUF1317 family protein | |||
| 15925 | M | M.EfeC13ORF14690P (100% identity) | M.Efe42C24ORF15925P | |
| 15930 | 93 aa hypothetical protein | |||
| 17915 | HNH endonuclease | |||
| 17920 | R | Efe42C13ORF17625P (100% identity) | Efe42C24ORF17920P | |
| 17925 | McrC family protein | |||
| 18595 | DNA-binding transcriptional regulator Fis | |||
| 18600 | M | M.EfeTORF37040P (100% identity) | M.Efe42C24ORF18600P | |
| 18605 | DUF2556 family protein | |||
| 19120 | ribulose-phosphate 3-epimerase | |||
| 19125 | M | M.EfeTDamP (100% identity) | M.Efe42C24DamP | |
| 19130 | cell division protein DamX | |||
| plasmid pRHB42-C24_2 | ||||
| 22295 | 103 aa hypothetical protein | |||
| 22300 | M | M.Efe42C13ORF22005P (100% identity) | SAY | M.Efe42C24ORF22300P |
| 22305 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17855 | endoribonuclease SymE | |||
| 17860 | R | EfeTMcrBP (100% identity) | Efe42C24McrB2P | |
| 17865 | R | EfeMcrCP (100% identity) | Efe42C24McrC2P | |
| 17920 | HNH endonuclease | |||
| 17925 | R | EfeEF02McrC2P (100% identity) | Efe42C24McrCP | |
| 17930 | R | EfeEF02McrB2P (100% identity) | Efe42C24McrBP | |
| 17935 | DUF4942 domain-containing protein | |||