Escherichia coli RHBSTW-00004 |
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Putative Escherichia coli RHBSTW-00004 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
Complete sequence: 5,025,981 bp
GenBank #: CP056914
REBASE acronym: EcoW004
Org_num: 43195
All begin HV028_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 12150 | 60 aa hypothetical protein | |||
| 12155 | R | EcoVA2ORFIP (100% identity) | EcoW004ORF12170P | |
| 12160 | S | S.Mmo48659ORF2735P (100% identity) | S.EcoW004ORF12170P | |
| 12165 | AAA family ATPase | |||
| 12170 | M | M.Mmo48659ORF2735P (100% identity) | M.EcoW004ORF12170P | |
| 12175 | 106 aa hypothetical protein | |||
| 18635 | 165 aa hypothetical protein | |||
| 18640 | R | EcoT219ORF19435P (100% identity) | GCCANNNNNGTG | EcoW004ORF18655P |
| 18645 | DUF4268 domain-containing protein | |||
| 18650 | S | S.EcoT219ORF19435P (100% identity) | GCCANNNNNGTG | S.EcoW004ORF18655P |
| 18655 | M | M.EcoT219ORF19435P (100% identity) | GCCANNNNNGTG | M.EcoW004ORF18655P |
| 18660 | toll/interleukin-1 receptor domain-containing | |||
| 18975 | 237 aa hypothetical protein | |||
| 18980 | R | EcoZ247ORF19790P (100% identity) | EcoW004ORF18990P | |
| 18985 | S | S.EcoZ247ORF19790P (100% identity) | S.EcoW004ORF18990P | |
| 18990 | M | M.EcoZ247ORF19790P (100% identity) | M.EcoW004ORF18990P | |
| 18995 | DUF262 domain-containing protein | |||
| 21115 | ash family protein | |||
| 21120 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoW004ORF21125P |
| 21125 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoW004ORF21125P |
| 21130 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoW004ORF21125P |
| 21135 | type IV toxin-antitoxin system AbiEi family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6080 | drug/metabolite exporter YedA | |||
| 6085 | V | V.SflC32DcmP (74% identity) | V.EcoW004DcmP | |
| 6090 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoW004DcmP |
| 6095 | phosphohydrolase | |||
| 13145 | DNA-binding transcriptional regulator Fis | |||
| 13150 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoW004ORF13150P |
| 13155 | DUF2556 family protein | |||
| 13745 | ribulose-phosphate 3-epimerase | |||
| 13750 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoW004DamP |
| 13755 | cell division protein DamX | |||
| 18625 | integrase arm-type DNA-binding domain-containing | |||
| 18630 | R | EcoT219ORF19410P (100% identity) | GAAC | EcoW004ORF18630P |
| 18635 | 165 aa hypothetical protein | |||
| 19225 | PerC family transcriptional regulator | |||
| 19230 | M | M.Eco9056ORF4455P (100% identity) | GATC | M.EcoW004ORF19230P |
| 19235 | LexA family transcriptional regulator | |||
| 19270 | 67 aa hypothetical protein | |||
| 19275 | M | M.Sso63633ORF22290P (100% identity) | M.EcoW004ORF19275P | |
| 19280 | phage lysis protein EssD | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18990 | SAM-dependent DNA methyltransferase | |||
| 18995 | R | EcoT219GmrSDP (100% identity) | EcoW004GmrDP | |
| 19000 | cell filamentation protein Fic | |||