Citrobacter species RHBSTW-00053 |
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Putative Citrobacter species RHBSTW-00053 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,167,268 bp | CP056888 |
| plasmid pRHBSTW-00053_2: | 301,637 bp | CP056889 |
REBASE acronym: Csp053
Org_num: 43064
All begin HV045_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6465 | ankyrin repeat domain-containing protein | |||
| 6470 | R | EcoXJ62ORF5350P (100% identity) | Csp053ORF6480P | |
| 6475 | S | S.Csp137ORF6645P (100% identity) | S.Csp053ORF6480P | |
| 6480 | M | M.EcoP44ORFBP (100% identity) | M.Csp053ORF6480P | |
| 6485 | transposase | |||
| 10825 | 391 aa hypothetical protein | |||
| 10830 | M | M.Csp678ORF13180P (100% identity) | M.Csp053ORF10830P | |
| 10835 | S | S2.Csp678ORF13180P (100% identity) | S.Csp053ORF10830P | |
| 10840 | IS5-like element IS5 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1725 | cell division protein DamX | |||
| 1730 | M | M.Eco9067DamP (100% identity) | GATC | M.Csp053DamP |
| 1735 | ribulose-phosphate 3-epimerase | |||
| 2285 | DUF2556 family protein | |||
| 2290 | M | M.Csp976ORF2290P (100% identity) | ATGCAT | M.Csp053ORF2290P |
| 2295 | tyrosine-type recombinase/integrase | |||
| 6910 | recombination protein NinG | |||
| 6915 | M | M.Csp678ORF17135P (100% identity) | M.Csp053ORF6915P | |
| 6920 | antitermination protein | |||
| 8250 | recombination protein NinG | |||
| 8255 | M | M.Csp678ORF17135P (100% identity) | M.Csp053ORF8255P | |
| 8260 | antitermination protein | |||
| 10525 | phosphohydrolase | |||
| 10530 | M | M.CspTSA1ORF9545P (100% identity) | CCWGG | M.Csp053ORF10530P |
| 10535 | V | V.Eco9067ORF2227P (100% identity) | V.Csp053ORF10530P | |
| 10540 | drug/metabolite exporter YedA | |||
| 11680 | alpha/beta hydrolase | |||
| 11685 | M | M.PdiESL4ORF7880P (100% identity) | M.Csp053ORF11685P | |
| 11690 | 921 aa hypothetical protein | |||
| 21855 | 149 aa hypothetical protein | |||
| 21860 | R | Csp976ORF21300P (100% identity) | Csp053ORF21860P | |
| 21865 | toprim domain-containing protein | |||
| 22565 | DUF2441 domain-containing protein | |||
| 22570 | M | M.EclCZORF15275P (100% identity) | M.Csp053ORF22570P | |
| 22575 | 144 aa hypothetical protein | |||
| 23155 | 301 aa hypothetical protein | |||
| 23160 | R | Csp976ORF22390P (100% identity) | Csp053ORF23165P | |
| ??? | M | M.Csp976ORF22390P (100% identity) | M.Csp053ORF23165P | |
| 23170 | 86 aa hypothetical protein | |||
| plasmid pRHBSTW-00053_2 | ||||
| 25755 | recombinase family protein | |||
| 25760 | R | Sen23701ORF24490P (100% identity) | CCWGG | Csp053ORF25765P |
| 25765 | M | M.SflLIN11ORF24665P (100% identity) | CCWGG | M.Csp053ORF25765P |
| 25770 | IS1 family transposase | |||
| 25995 | DNA polymerase III subunit beta | |||
| 26000 | M | M.Sen3039ORF24445P (100% identity) | M.Csp053ORF26000P | |
| 26005 | 76 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21665 | BrnT family toxin | |||
| 21670 | R | CspC21MrrP (100% identity) | Csp053MrrP | |
| 21675 | 46 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3380 | IS5 family transposase | |||
| 3385 | M | M.Csp678ORF3365BP (100% identity) | M.Csp053ORF3385P | |
| 3390 | replication endonuclease | |||