Escherichia coli RHBSTW-00082 |
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Putative Escherichia coli RHBSTW-00082 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,248,010 bp | CP056870 |
| plasmid pRHBSTW-00082_2: | 92,934 bp | CP056871 |
| plasmid pRHBSTW-00082_3: | 72,712 bp | CP056872 |
REBASE acronym: EcoW082
Org_num: 43200
All begin HV058_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13520 | type II toxin-antitoxin system RelB/DinJ family | |||
| 13525 | M | M.SenS0935ORF770P (99% identity) | ACYNNNNNNGTTC | M.EcoW082ORF13525P |
| 13530 | S | S.Ecos53ORF20340P (100% identity) | ACYNNNNNNGTTC | S.EcoW082ORF13525P |
| 13535 | R | Ecos53ORF20340P (100% identity) | ACYNNNNNNGTTC | EcoW082ORF13525P |
| 13540 | 184 aa hypothetical protein | |||
| 18060 | endoribonuclease SymE | |||
| 18065 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoW082ORF18075P |
| 18070 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoW082ORF18075P |
| 18075 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoW082ORF18075P |
| 18080 | restriction endonuclease | |||
| 19880 | ash family protein | |||
| 19885 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoW082ORF19890P |
| 19890 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoW082ORF19890P |
| 19895 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoW082ORF19890P |
| 19900 | type IV toxin-antitoxin system AbiEi family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2865 | DUF262 domain-containing protein | |||
| 2870 | R | R2.EcosS3ORF2905P (100% identity) | EcoW082ORF2875P | |
| 2875 | M | M2.EcosS3ORF2905P (100% identity) | M.EcoW082ORF2875P | |
| 2880 | antitermination protein | |||
| 3735 | drug/metabolite exporter YedA | |||
| 3740 | V | V.SflC32DcmP (74% identity) | V.EcoW082DcmP | |
| 3745 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoW082DcmP |
| 3750 | phosphohydrolase | |||
| 7195 | PerC family transcriptional regulator | |||
| 7200 | M | M.EcoW081ORF7185P (100% identity) | M.EcoW082ORF7200P | |
| 7205 | DUF1382 family protein | |||
| 11425 | DNA-binding transcriptional regulator Fis | |||
| 11430 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoW082ORF11430P |
| 11435 | DUF2556 family protein | |||
| 12025 | ribulose-phosphate 3-epimerase | |||
| 12030 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoW082DamP |
| 12035 | cell division protein DamX | |||
| 16705 | conjugal transfer protein TraG N-terminal | |||
| 16710 | M | M.EcosS3ORF15775P (100% identity) | M.EcoW082ORF16710P | |
| 16715 | R | EcosS3ORF15775P (100% identity) | EcoW082ORF16710P | |
| 16720 | 555 aa hypothetical protein | |||
| 23340 | 71 aa hypothetical protein | |||
| 23345 | M | M.KpnYN1ORFGP (89% identity) | M.EcoW082ORF23345P | |
| 23350 | helix-turn-helix transcriptional regulator | |||
| 25600 | TrmB family transcriptional regulator | |||
| 25605 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoW082ORF25605P |
| 25620 | DUF3927 family protein | |||
| plasmid pRHBSTW-00082_2 | ||||
| 26115 | 73 aa hypothetical protein | |||
| 26120 | M | M.KpnVA569ORF28145P (100% identity) | M.EcoW082ORF26120P | |
| 26125 | 102 aa hypothetical protein | |||
| plasmid pRHBSTW-00082_3 | ||||
| 26330 | 103 aa hypothetical protein | |||
| 26335 | M | M.EcoW081ORF26305P (100% identity) | M.EcoW082ORF26335P | |
| 26340 | 73 aa hypothetical protein | |||