Citrobacter species RHBSTW-00137 |
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Putative Citrobacter species RHBSTW-00137 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,138,391 bp | CP056822 |
| plasmid pRHBSTW-00137_2: | 296,541 bp | CP056823 |
| plasmid pRHBSTW-00137_3: | 5,788 bp | CP056824 |
REBASE acronym: Csp137
Org_num: 43003
All begin HV091_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6630 | ankyrin repeat domain-containing protein | |||
| 6635 | R | EcoXJ62ORF5350P (100% identity) | Csp137ORF6645P | |
| 6640 | S | S.Csp053ORF6480P (100% identity) | S.Csp137ORF6645P | |
| 6645 | M | M.EcoP44ORFBP (100% identity) | M.Csp137ORF6645P | |
| 6650 | transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1725 | cell division protein DamX | |||
| 1730 | M | M.Eco9067DamP (100% identity) | GATC | M.Csp137DamP |
| 1735 | ribulose-phosphate 3-epimerase | |||
| 2285 | DUF2556 family protein | |||
| 2290 | M | M.Csp976ORF2290P (100% identity) | ATGCAT | M.Csp137ORF2290P |
| 2295 | tyrosine-type recombinase/integrase | |||
| 8120 | recombination protein NinG | |||
| 8125 | M | M.Csp976ORF8100P (100% identity) | M.Csp137ORF8125P | |
| 8130 | antitermination protein | |||
| 10240 | phosphohydrolase | |||
| 10245 | M | M.Csp976ORF10220P (100% identity) | CCWGG | M.Csp137ORF10245P |
| 10250 | V | V.Eco9067ORF2227P (100% identity) | V.Csp137ORF10245P | |
| 10255 | drug/metabolite exporter YedA | |||
| 21165 | 149 aa hypothetical protein | |||
| 21170 | R | Csp976ORF21300P (100% identity) | Csp137ORF21170P | |
| 21175 | toprim domain-containing protein | |||
| 22180 | 301 aa hypothetical protein | |||
| 22185 | R | Csp976ORF22390P (100% identity) | Csp137ORF22190P | |
| ??? | M | M.Csp976ORF22390P (100% identity) | M.Csp137ORF22190P | |
| 22195 | tyrosine-type recombinase/integrase | |||
| 22815 | deoxyguanosinetriphosphate triphosphohydrolase | |||
| 22820 | M | M.Kgr634ORF26125P (100% identity) | M.Csp137ORF22820P | |
| 22825 | 8-oxoguanine DNA glycosylase | |||
| plasmid pRHBSTW-00137_2 | ||||
| 25370 | recombinase family protein | |||
| 25375 | R | Sen23701ORF24490P (100% identity) | CCWGG | Csp137ORF25380P |
| 25380 | M | M.SflLIN11ORF24665P (100% identity) | CCWGG | M.Csp137ORF25380P |
| 25385 | IS1 family transposase | |||
| 25610 | DNA polymerase III subunit beta | |||
| 25615 | M | M.Sen3039ORF24445P (100% identity) | M.Csp137ORF25615P | |
| 25620 | 76 aa hypothetical protein | |||
| plasmid pRHBSTW-00137_3 | ||||
| 26645 | 60 aa hypothetical protein | |||
| 26650 | R | Mmo24670ORF20495P (89% identity) | Csp137ORF26655P | |
| 26655 | M | M.Mmo24670ORF20495P (79% identity) | M.Csp137ORF26655P | |
| 26660 | Rop family plasmid primer RNA-binding protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3680 | DUF262 domain-containing protein | |||
| 3685 | R | Yen3502ORF950P (100% identity) | Csp137ORF3690P | |
| 3690 | M | M.Yen3502ORF950P (100% identity) | M.Csp137ORF3690P | |
| 3695 | DUF2130 domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20975 | BrnT family toxin | |||
| 20980 | R | CspC21MrrP (100% identity) | Csp137Mrr2P | |
| 20985 | 46 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3370 | IS5 family transposase | |||
| 3375 | M | M.Csp678ORF3365BP (100% identity) | M.Csp137ORF3375P | |
| 3380 | replication endonuclease | |||