Helicobacter pylori 87A3 |
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Putative Helicobacter pylori 87A3 RM systems
Ref: Estibariz,I. unpublished
REBASE ref # 31007
Complete sequence: 1,563,302 bp
GenBank #: CP036387
REBASE acronym: Hpy87A3
Org_num: 43258
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | S | S.HpyH1ORFD1P (100% identity) | S.Hpy87A3ORFC1P | |
| ??? | R | HpyH1ORFPP (100% identity) | Hpy87A3ORFXP | |
| ??? | S | S2.HpyH1ORFPP (100% identity) | S2.Hpy87A3ORFXP | |
| ??? | S | S1.HpyH1ORFPP (100% identity) | S1.Hpy87A3ORFXP | |
| ??? | M | M.HpyH1ORFPP (100% identity) | M.Hpy87A3ORFXP | |
| ??? | R | HpyH1ORFHP (100% identity) | Hpy87A3ORFWP | |
| ??? | M | M.HpyH1ORFHP (100% identity) | M.Hpy87A3ORFWP | |
| ??? | S | S.HpyH1ORFHP (100% identity) | S.Hpy87A3ORFWP | |
| ??? | R | HpyH1ORFZP (100% identity) | Hpy87A3ORFB1P | |
| ??? | M | M.HpyH1ORFZP (100% identity) | M.Hpy87A3ORFB1P | |
| ??? | S | S.HpyH1ORFZP (100% identity) | S.Hpy87A3ORFB1P | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | RM | HpyH1ORFXP (100% identity) | Hpy87A3ORFHP | |
| ??? | RM | HpyH1ORFWP (100% identity) | Hpy87A3ORFA1P | |
| ??? | S | S.HpyH1ORFWP (50% identity) | S1.Hpy87A3ORFA1P | |
| ??? | S | S2.Hpy87C7ORFA1P (100% identity) | S2.Hpy87A3ORFA1P | |
| ??? | M | M.Hpy8C10ORFLP (100% identity) | GTNNAC | M.Hpy87A3ORFDP |
| ??? | R | HpyH1VIIIP (100% identity) | GTNNAC | Hpy87A3ORFDP |
| ??? | M | M.HpyH1I (100% identity) | CATG | M.Hpy87A3ORFSP |
| ??? | R | HpyH1XP (100% identity) | TCNGA | Hpy87A3ORFGP |
| ??? | M | M.HpyH1X (100% identity) | TCNGA | M.Hpy87A3ORFGP |
| ??? | M | M.HpyH1ORFBP (100% identity) | M.Hpy87A3ORFTP | |
| ??? | R | HpyH1XIVP (100% identity) | TCNNGA | Hpy87A3ORFOP |
| ??? | M | M.HpyH1XIV (100% identity) | TCNNGA | M.Hpy87A3ORFOP |
| ??? | M | M.HpyH1II (100% identity) | ATTAAT | M.Hpy87A3ORFRP |
| ??? | M | M.HpyH1ORFUP (100% identity) | ACNGT | M.Hpy87A3ORFKP |
| ??? | R | HpyH1ORFUP (100% identity) | ACNGT | Hpy87A3ORFKP |
| ??? | M | M.HpyH1ORFVP (100% identity) | ACGT | M.Hpy87A3ORFIP |
| ??? | R | HpyH1ORFVP (100% identity) | ACGT | Hpy87A3ORFIP |
| ??? | M | M.HpyH1ORFIP (100% identity) | GTAC | M.Hpy87A3ORFEP |
| ??? | R | HpyH1ORFIP (100% identity) | GTAC | Hpy87A3ORFEP |
| ??? | RM | HpyH1ORFRBP (100% identity) | Hpy87A3ORFZBP | |
| ??? | RM | HpyH1ORFRAP (100% identity) | Hpy87A3ORFZAP | |
| ??? | M | M.HpyH1ORFQP (100% identity) | M.Hpy87A3ORFYP | |
| ??? | R | HpyH1ORFQP (100% identity) | Hpy87A3ORFYP | |
| ??? | M | M.HpyH1V (100% identity) | CTNAG | M.Hpy87A3ORFNP |
| ??? | R | HpyH1VP (100% identity) | CTNAG | Hpy87A3ORFNP |
| ??? | M | M.HpyH1III (100% identity) | CCGG | M.Hpy87A3ORFVP |
| ??? | R | HpyH1IIIP (91% identity) | CCGG | Hpy87A3ORFVP |
| ??? | M | M.HpyH1IX (100% identity) | TCGA | M.Hpy87A3ORFUP |
| ??? | M | M.HpyH1XVI (100% identity) | GATC | M.Hpy87A3ORFPP |
| ??? | R | HpyH1XVIP (100% identity) | GATC | Hpy87A3ORFPP |
| ??? | cytosine specific DNA methyltransferase | |||
| ??? | M | M2.HpyH1IVP (100% identity) | CCTC | M2.Hpy87A3ORFAP |
| ??? | R | HpyH1VIIP (100% identity) | GANTC | Hpy87A3ORFMP |
| ??? | M | M.HpySG38X (100% identity) | GANTC | M.Hpy87A3ORFMP |
| ??? | RM | HpyH1ORFA1P (100% identity) | Hpy87A3ORFFP | |
| ??? | R | HpyH1VIP (100% identity) | GAAGA | Hpy87A3ORFBP |
| ??? | M | M2.HpyH1VI (100% identity) | GAAGA | M1.Hpy87A3ORFBP |
| ??? | M | M2.Hpyfe101ORF6985P (100% identity) | GAAGA | M2.Hpy87A3ORFBP |
| ??? | R | HpyH1XVP (100% identity) | TGCA | Hpy87A3ORFQP |
| ??? | M | M.HpyH1XV (100% identity) | TGCA | M.Hpy87A3ORFQP |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M.HpyH1ORFYP (100% identity) | M.Hpy87A3ORFLP | |
| ??? | R | HpyH1ORFYP (100% identity) | Hpy87A3ORFLP | |
| ??? | M | M.HpyH1ORFDP (100% identity) | M.Hpy87A3ORFCP | |
| ??? | R | HpyH1ORFDP (100% identity) | Hpy87A3ORFCP | |
| ??? | M | M.HpyH1XI (100% identity) | M.Hpy87A3ORFJP | |
| ??? | R | HpyH1XIP (100% identity) | Hpy87A3ORFJP | |