Helicobacter pylori 103A4 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Helicobacter pylori 103A4 RM systems
Ref: Estibariz,I. unpublished
REBASE ref # 31007
Complete sequence: 1,563,266 bp
GenBank #: CP036385
REBASE acronym: Hpy103A4
Org_num: 43256
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | S | S.HpyH1ORFD1P (100% identity) | S.Hpy103A4ORFD1P | |
| ??? | R | HpyH1ORFPP (100% identity) | Hpy103A4ORFA1P | |
| ??? | restriction endonuclease subunit S | |||
| ??? | restriction endonuclease subunit S, partial | |||
| ??? | M | M.HpyH1ORFPP (100% identity) | M.Hpy103A4ORFA1P | |
| ??? | HsdR family type I site-specific deoxyribonuclease | |||
| ??? | S | S2.HpyH1ORFPP (100% identity) | S2.Hpy103A4ORFB1P | |
| ??? | S | S1.HpyH1ORFPP (100% identity) | S1.Hpy103A4ORFB1P | |
| ??? | type I restriction-modification system subunit M | |||
| ??? | R | HpyH1ORFHP (100% identity) | Hpy103A4ORFXP | |
| ??? | M | M.HpyH1ORFHP (100% identity) | M.Hpy103A4ORFXP | |
| ??? | S | S.HpyH1ORFHP (100% identity) | S.Hpy103A4ORFXP | |
| ??? | R | HpyH1ORFZP (100% identity) | Hpy103A4ORFC1P | |
| ??? | M | M.HpyH1ORFZP (100% identity) | M.Hpy103A4ORFC1P | |
| ??? | S | S.HpyH1ORFZP (100% identity) | S.Hpy103A4ORFC1P | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | RM | HpyH1ORFXP (100% identity) | Hpy103A4ORFJP | |
| ??? | RM | HpyH1ORFWP (100% identity) | Hpy103A4ORFCP | |
| ??? | S | S.HpyH1ORFWP (100% identity) | S.Hpy103A4ORFCP | |
| ??? | M | M.Hpy8C10ORFLP (100% identity) | GTNNAC | M.Hpy103A4ORFEP |
| ??? | R | HpyH1VIIIP (100% identity) | GTNNAC | Hpy103A4ORFEP |
| ??? | M | M.HpyH1I (100% identity) | CATG | M.Hpy103A4ORFSP |
| ??? | R | HpyH1XP (100% identity) | TCNGA | Hpy103A4ORFIP |
| ??? | M | M.HpyH1X (100% identity) | TCNGA | M.Hpy103A4ORFIP |
| ??? | M | M.HpyH1ORFBP (100% identity) | M.Hpy103A4ORFTP | |
| ??? | R | HpyH1XIVP (100% identity) | TCNNGA | Hpy103A4ORFDP |
| ??? | M | M.HpyH1XIV (100% identity) | TCNNGA | M.Hpy103A4ORFDP |
| ??? | M | M.HpyH1II (100% identity) | ATTAAT | M.Hpy103A4ORFUP |
| ??? | M | M.HpyH1ORFUP (100% identity) | ACNGT | M.Hpy103A4ORFMP |
| ??? | R | HpyH1ORFUP (100% identity) | ACNGT | Hpy103A4ORFMP |
| ??? | M | M.HpyH1ORFVP (100% identity) | ACGT | M.Hpy103A4ORFKP |
| ??? | R | HpyH1ORFVP (100% identity) | ACGT | Hpy103A4ORFKP |
| ??? | M | M.HpyH1ORFIP (100% identity) | GTAC | M.Hpy103A4ORFGP |
| ??? | R | HpyH1ORFIP (100% identity) | GTAC | Hpy103A4ORFGP |
| ??? | RM | HpyH1ORFRBP (100% identity) | Hpy103A4ORFZBP | |
| ??? | RM | HpyH1ORFRAP (100% identity) | Hpy103A4ORFZAP | |
| ??? | M | M.HpyH1ORFQP (100% identity) | M.Hpy103A4ORFYP | |
| ??? | R | HpyH1ORFQP (100% identity) | Hpy103A4ORFYP | |
| ??? | M | M.HpyH1V (100% identity) | CTNAG | M.Hpy103A4ORFPP |
| ??? | R | HpyH1VP (100% identity) | CTNAG | Hpy103A4ORFPP |
| ??? | M | M.HpyH1III (100% identity) | CCGG | M.Hpy103A4ORFWP |
| ??? | R | HpyH1IIIP (91% identity) | CCGG | Hpy103A4ORFWP |
| ??? | M | M.HpyH1IX (100% identity) | TCGA | M.Hpy103A4ORFVP |
| ??? | M | M.HpyH1XVI (100% identity) | GATC | M.Hpy103A4ORFQP |
| ??? | R | HpyH1XVIP (100% identity) | GATC | Hpy103A4ORFQP |
| ??? | M | M2.HpyH1IVP (100% identity) | CCTC | M2.Hpy103A4ORFAP |
| ??? | M | M1.HpyH1IV (100% identity) | CCTC | M1.Hpy103A4ORFAP |
| ??? | R | HpyH1VIIP (100% identity) | GANTC | Hpy103A4ORFOP |
| ??? | M | M.HpySG38X (100% identity) | GANTC | M.Hpy103A4ORFOP |
| ??? | RM | HpyH1ORFA1P (100% identity) | Hpy103A4ORFHP | |
| ??? | R | HpyH1VIP (100% identity) | GAAGA | Hpy103A4ORFBP |
| ??? | M | M2.HpyH1VI (100% identity) | GAAGA | M1.Hpy103A4ORFBP |
| ??? | M | M2.Hpyfe101ORF6985P (100% identity) | GAAGA | M2.Hpy103A4ORFBP |
| ??? | R | HpyH1XVP (100% identity) | TGCA | Hpy103A4ORFRP |
| ??? | M | M.HpyH1XV (100% identity) | TGCA | M.Hpy103A4ORFRP |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M.HpyH1ORFYP (100% identity) | M.Hpy103A4ORFNP | |
| ??? | R | HpyH1ORFYP (100% identity) | Hpy103A4ORFNP | |
| ??? | M | M.HpyH1ORFDP (100% identity) | M.Hpy103A4ORFFP | |
| ??? | R | Hpy78C8ORFCP (100% identity) | Hpy103A4ORFFP | |
| ??? | M | M.HpyH1XI (100% identity) | M.Hpy103A4ORFLP | |
| ??? | R | HpyH1XIP (100% identity) | Hpy103A4ORFLP | |