Escherichia coli RHBSTW-00300 |
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Putative Escherichia coli RHBSTW-00300 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,000,558 bp | CP056642 |
| plasmid pRHBSTW-00300_2: | 132,206 bp | CP056643 |
REBASE acronym: Eco0300
Org_num: 42805
All begin HV146_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3070 | endoribonuclease SymE | |||
| 3075 | S | S.Rel102253ORF4499P (50% identity) | S.Eco0300ORF3080P | |
| 3080 | M | M.Eco22C08ORF20060P (99% identity) | M.Eco0300ORF3080P | |
| 3085 | R | Eco34C21ORF2660P (99% identity) | Eco0300ORF3080P | |
| 3090 | adenine/cytosine-specific restriction | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2165 | 500 aa hypothetical protein | |||
| 2170 | M | M.EcoSTEC413ORF4250P (100% identity) | M.Eco0300ORF2170P | |
| 2175 | 68 aa hypothetical protein | |||
| 2180 | ISL3 family transposase | |||
| 2185 | R | EcoSTEC413ORF4260P (100% identity) | GAAC | Eco0300ORF2185P |
| 2190 | integrase | |||
| 2920 | DUF4102 domain-containing protein | |||
| 2925 | R | EcoSE11DptFP (99% identity) | Eco0300DptFP | |
| 2930 | DNA phosphorothioation-dependent restriction | |||
| 2925 | DNA phosphorothioation-dependent restriction | |||
| 2930 | R | Kox9149DptGP (99% identity) | Eco0300DptGP | |
| 2935 | DNA phosphorothioation-dependent restriction | |||
| 2930 | DNA phosphorothioation-dependent restriction | |||
| 2935 | R | Eco9052DptHP (97% identity) | Eco0300DptHP | |
| 2940 | 294 aa hypothetical protein | |||
| 2945 | DGQHR domain-containing protein | |||
| 2950 | M | M.Kox13775DndEP (92% identity) | M.Eco0300DndEP | |
| 2955 | DNA sulfur modification protein DndD | |||
| 2950 | DNA sulfur modification protein DndE | |||
| 2955 | M | M.EcoMc31DndDP (99% identity) | M.Eco0300DndDP | |
| 2960 | DNA phosphorothioation system sulfurtransferase | |||
| 2955 | DNA sulfur modification protein DndD | |||
| 2960 | M | M.EcoSE11DndCP (99% identity) | M.Eco0300DndCP | |
| 2965 | DNA sulfur modification protein DndB | |||
| 2960 | DNA phosphorothioation system sulfurtransferase | |||
| 2965 | M | M.EcoSE11DndBP (100% identity) | M.Eco0300DndBP | |
| 2970 | IS3 family transposase | |||
| 13810 | drug/metabolite exporter YedA | |||
| 13815 | V | V.Esp4742DcmP (97% identity) | V.Eco0300DcmP | |
| 13820 | M | M.Eco34C21DcmP (98% identity) | CCWGG | M.Eco0300DcmP |
| 13825 | phosphohydrolase | |||
| 16990 | PerC family transcriptional regulator | |||
| 16995 | M | M.Eho218ORF16395P (100% identity) | M.Eco0300ORF16995P | |
| 17000 | DUF1382 family protein | |||
| 21470 | DNA-binding transcriptional regulator Fis | |||
| 21475 | M | M.Eco17C17ORF18850P (97% identity) | ATGCAT | M.Eco0300ORF21475P |
| 21480 | DUF2556 family protein | |||
| 22000 | ribulose-phosphate 3-epimerase | |||
| 22005 | M | M.Eco34C24DamP (100% identity) | GATC | M.Eco0300DamP |
| 22010 | cell division protein DamX | |||
| plasmid pRHBSTW-00300_2 | ||||
| 24445 | 103 aa hypothetical protein | |||
| 24450 | M | M.Sen527ORF25750P (100% identity) | M.Eco0300ORF24450P | |
| 24455 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3085 | type I restriction-modification system | |||
| 3090 | R | EmaW492MrrP (100% identity) | Eco0300MrrP | |
| 3095 | GTPase | |||