Citrobacter species RHBSTW-00229 |
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Putative Citrobacter species RHBSTW-00229 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
Complete sequence: 5,231,053 bp
GenBank #: CP056647
REBASE acronym: Csp229
Org_num: 42784
All begin HV135_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3680 | DUF4935 domain-containing protein | |||
| 3685 | S | S.Kva82ORF26660P (98% identity) | S.Csp229ORF3690P | |
| 3690 | M | M.Kva82ORF26660P (99% identity) | M.Csp229ORF3690P | |
| 3695 | R | Kva82ORF26660P (99% identity) | Csp229ORF3690P | |
| 3700 | toll/interleukin-1 receptor domain-containing | |||
| 4005 | DUF262 domain-containing protein | |||
| 4010 | R | Csp944ORF3280P (100% identity) | Csp229ORF4020P | |
| 4015 | S | S.Csp944ORF3280P (100% identity) | S.Csp229ORF4020P | |
| 4020 | M | M.Csp944ORF3280P (100% identity) | M.Csp229ORF4020P | |
| 4025 | GTPase | |||
| 14640 | M48 family metallopeptidase | |||
| 14645 | R | EcoEC98ORF23975P (99% identity) | GATGNNNNNGTT | Csp229ORF14645P |
| 14650 | YecA family protein | |||
| 14655 | S | S.KpnKLZTORF27160P (100% identity) | GATGNNNNNGTT | S.Csp229ORF14645P |
| 14660 | IS5 family transposase | |||
| 17020 | nuclease | |||
| 17025 | S | S.Csp944ORF7525P (100% identity) | S.Csp229ORF17030P | |
| 17030 | M | M.Csp944ORF7525P (100% identity) | M.Csp229ORF17030P | |
| 17035 | R | Csp944ORF7525P (100% identity) | Csp229ORF17030P | |
| 17040 | PD-(D/E)XK nuclease family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1445 | 187 aa hypothetical protein | |||
| 1450 | M | M2.CfrCF13ORF16180P (96% identity) | M1.Csp229ORF1450P | |
| 1455 | M | M1.CfrC06ORF15615P (99% identity) | M2.Csp229ORF1450P | |
| 1460 | RusA family crossover junction | |||
| 14940 | drug/metabolite exporter YedA | |||
| 14945 | V | V.Csp944ORF10040P (100% identity) | V.Csp229ORF14950P | |
| 14950 | M | M.Csp944ORF10040P (100% identity) | CCWGG | M.Csp229ORF14950P |
| 14955 | phosphohydrolase | |||
| 22610 | tyrosine-type recombinase/integrase | |||
| 22615 | M | M.Csp944ORF22235P (100% identity) | ATGCAT | M.Csp229ORF22615P |
| 22620 | DUF2556 family protein | |||
| 23175 | ribulose-phosphate 3-epimerase | |||
| 23180 | M | M.Eco9067DamP (100% identity) | GATC | M.Csp229DamP |
| 23185 | cell division protein DamX | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6945 | DUF2130 domain-containing protein | |||
| 6950 | M | M.EcoH6ORF19655P (100% identity) | M.Csp229ORF6950P | |
| 6955 | R | EcoH6ORF19655P (100% identity) | Csp229ORF6950P | |
| 6960 | 63 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4000 | DUF1127 domain-containing protein | |||
| 4005 | R | Cbr1b1GmrSDP (99% identity) | Csp229GmrDP | |
| 4010 | type I restriction endonuclease subunit R | |||