Escherichia coli RHBSTW-00187 |
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Putative Escherichia coli RHBSTW-00187 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
Complete sequence: 4,763,430 bp
GenBank #: CP056662
REBASE acronym: Eco0187
Org_num: 43020
All begin HV115_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19035 | DUF262 domain-containing protein | |||
| 19040 | M | M.Eco17C12ORF2365P (98% identity) | M.Eco0187ORF19040P | |
| 19045 | S | S.EcoGF43ORF10860P (59% identity) | S.Eco0187ORF19040P | |
| 19050 | R | Eco788309ORF3575P (98% identity) | Eco0187ORF19040P | |
| 19055 | 237 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1835 | cell division protein DamX | |||
| 1840 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco0187DamP |
| 1845 | ribulose-phosphate 3-epimerase | |||
| 2435 | DUF2556 family protein | |||
| 2440 | M | M.Ecoi68ORF2692P (100% identity) | ATGCAT | M.Eco0187ORF2440P |
| 2445 | DNA-binding transcriptional regulator Fis | |||
| 9125 | phosphohydrolase | |||
| 9130 | M | M.Ecos135DcmP (99% identity) | CCWGG | M.Eco0187DcmP |
| 9135 | V | V.EcosE1DcmP (72% identity) | V.Eco0187DcmP | |
| 9140 | drug/metabolite exporter YedA | |||
| 19245 | transposase | |||
| 19250 | M | M.EcoSE11DndBP (100% identity) | M.Eco0187DndBP | |
| 19255 | DNA phosphorothioation system sulfurtransferase | |||
| 19250 | DNA sulfur modification protein DndB | |||
| 19255 | M | M.EcoSE11DndCP (100% identity) | M.Eco0187DndCP | |
| 19260 | DNA sulfur modification protein DndD | |||
| 19255 | DNA phosphorothioation system sulfurtransferase | |||
| 19260 | M | M.EcoMc31DndDP (99% identity) | M.Eco0187DndDP | |
| 19265 | DNA sulfur modification protein DndE | |||
| 19260 | DNA sulfur modification protein DndD | |||
| 19265 | M | M.Kpn87729DndEP (99% identity) | M.Eco0187DndEP | |
| 19270 | DGQHR domain-containing protein | |||
| 19275 | 176 aa hypothetical protein | |||
| 19280 | R | Eco0224DptHP (99% identity) | Eco0187DptHP | |
| 19285 | DNA phosphorothioation-dependent restriction | |||
| 19280 | DNA phosphorothioation-dependent restriction | |||
| 19285 | R | EcoSE11DptGP (100% identity) | Eco0187DptGP | |
| 19290 | DNA phosphorothioation-dependent restriction | |||
| 19285 | DNA phosphorothioation-dependent restriction | |||
| 19290 | R | EcoSE11DptFP (100% identity) | Eco0187DptFP | |
| 19295 | DUF4102 domain-containing protein | |||
| 19985 | transcriptional regulator | |||
| 19995 | M | M.Eco8E3C05ORF20755P (99% identity) | GGCGCC | M.Eco0187ORF19995P |
| 20000 | R | Eco43SOC05ORF12795P (100% identity) | GGCGCC | Eco0187ORF19995P |
| 20005 | C | C.Eco8E3C05ORF20755P (100% identity) | C.Eco0187ORF19995P | |
| 20010 | lysine decarboxylation/transport transcriptional | |||