Escherichia coli RHBSTW-00366 |
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Putative Escherichia coli RHBSTW-00366 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,063,842 bp | CP056578 |
| plasmid pRHBSTW-00366_2: | 116,011 bp | CP056579 |
REBASE acronym: Eco0366
Org_num: 42813
All begin HV176_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19635 | endoribonuclease SymE | |||
| 19640 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | Eco0366ORF19650P |
| 19645 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.Eco0366ORF19650P |
| 19650 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.Eco0366ORF19650P |
| 19655 | restriction endonuclease | |||
| plasmid pRHBSTW-00366_2 | ||||
| 25140 | IS1 family transposase | |||
| 25145 | R | KpnKPH1ORF27575P (99% identity) | CAAYNNNNNCTGG | Eco0366ORF25155P |
| 25150 | S | S.SenBR076ORFFP (100% identity) | CAAYNNNNNCTGG | S.Eco0366ORF25155P |
| 25155 | M | M.SenceORFJP (99% identity) | CAAYNNNNNCTGG | M.Eco0366ORF25155P |
| 25160 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 395 | 71 aa hypothetical protein | |||
| 400 | M | M.KpnYN1ORFGP (89% identity) | M.Eco0366ORF400P | |
| 405 | helix-turn-helix transcriptional regulator | |||
| 2655 | TrmB family transcriptional regulator | |||
| 2660 | M | M.EcosS9ORF10680P (100% identity) | A | M.Eco0366ORF2660P |
| 2675 | DUF3927 family protein | |||
| 6425 | drug/metabolite exporter YedA | |||
| 6430 | V | V.SflC32DcmP (74% identity) | V.Eco0366DcmP | |
| 6435 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.Eco0366DcmP |
| 6440 | phosphohydrolase | |||
| 13530 | DNA-binding transcriptional regulator Fis | |||
| 13535 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco0366ORF13535P |
| 13540 | DUF2556 family protein | |||
| 14140 | ribulose-phosphate 3-epimerase | |||
| 14145 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco0366DamP |
| 14150 | cell division protein DamX | |||
| 19290 | helix-turn-helix domain-containing protein | |||
| 19295 | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M1.Eco0366ORF19295P |
| 19300 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.Eco0366ORF19295P |
| 19305 | R | EcosS9ORF2810P (100% identity) | GGTCTC | Eco0366ORF19295P |
| 19310 | McrC family protein | |||
| plasmid pRHBSTW-00366_2 | ||||
| 25080 | 73 aa hypothetical protein | |||
| 25085 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.Eco0366ORF25085P |
| 25090 | 102 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19305 | Alw26I/Eco31I/Esp3I family type II restriction | |||
| 19310 | R | EcosS9McrCP (99% identity) | Eco0366McrCP | |
| 19315 | R | EcosS3McrBP (100% identity) | Eco0366McrBP | |
| 19320 | glycosyltransferase family 2 protein | |||