Citrobacter species RHBSTW-00524 |
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Putative Citrobacter species RHBSTW-00524 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,251,041 bp | CP056421 |
| plasmid pRHBSTW-00524_2: | 112,583 bp | CP056422 |
| plasmid pRHBSTW-00524_3: | 47,363 bp | CP056423 |
REBASE acronym: Csp524
Org_num: 42786
All begin HV229_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5490 | IS1 family transposase | |||
| 5495 | R | Ror24150ORF17255P (100% identity) | GGANNNNNCTC | Csp524ORF5505P |
| 5500 | S | S.Ror24150ORF17255P (100% identity) | GGANNNNNCTC | S.Csp524ORF5505P |
| 5505 | M | M.Kqu5BL06ORF28940P (100% identity) | GGANNNNNCTC | M.Csp524ORF5505P |
| 5510 | 119 aa hypothetical protein | |||
| 10130 | CDP-diacylglycerol--glycerol-3-phosphate | |||
| 10150 | M | M.CspTSA1ORF9765P (99% identity) | M.Csp524ORF10150P | |
| 10155 | S | S.CspTSA1ORF9765P (100% identity) | S.Csp524ORF10150P | |
| 10160 | YecA family protein | |||
| 10165 | cold shock domain-containing protein | |||
| 10170 | R | CspTSA1ORF9765P (100% identity) | Csp524ORF10150P | |
| 10175 | M48 family metallopeptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1550 | cell division protein DamX | |||
| 1555 | M | M.Eco9067DamP (100% identity) | GATC | M.Csp524DamP |
| 1560 | ribulose-phosphate 3-epimerase | |||
| 7710 | arsenical pump-driving ATPase | |||
| 7715 | M | M.CkoK616DndBP (97% identity) | M.Csp524DndBP | |
| 7720 | DNA phosphorothioation system sulfurtransferase | |||
| 7715 | DNA sulfur modification protein DndB | |||
| 7720 | M | M.SspMYb239DndCP (98% identity) | M.Csp524DndCP | |
| 7725 | DNA sulfur modification protein DndD | |||
| 7720 | DNA phosphorothioation system sulfurtransferase | |||
| 7725 | M | M.DdaS31DndDP (95% identity) | M.Csp524DndDP | |
| 7730 | DNA sulfur modification protein DndE | |||
| 7725 | DNA sulfur modification protein DndD | |||
| 7730 | M | M.EtaRE04DndEP (94% identity) | M.Csp524DndEP | |
| 7735 | DGQHR domain-containing protein | |||
| 7740 | 174 aa hypothetical protein | |||
| 7745 | R | KpnsKp6DptHP (97% identity) | Csp524DptHP | |
| 7750 | DNA phosphorothioation-dependent restriction | |||
| 7745 | DNA phosphorothioation-dependent restriction | |||
| 7750 | R | Par021DptGP (97% identity) | Csp524DptGP | |
| 7755 | DNA phosphorothioation-dependent restriction | |||
| 7750 | DNA phosphorothioation-dependent restriction | |||
| 7755 | R | Efe9LTDptFP (97% identity) | Csp524DptFP | |
| 7760 | integrase arm-type DNA-binding domain-containing | |||
| 9925 | phosphohydrolase | |||
| 9930 | M | M.CspTSA1ORF9545P (100% identity) | CCWGG | M.Csp524ORF9930P |
| 9935 | V | V.Csp696ORF10355P (100% identity) | V.Csp524ORF9930P | |
| 9940 | drug/metabolite exporter YedA | |||
| 15990 | 112 aa hypothetical protein | |||
| 15995 | M | M.Cfr214ORF15860P (97% identity) | M.Csp524ORF15995P | |
| 16000 | 90 aa hypothetical protein | |||
| 16000 | 90 aa hypothetical protein | |||
| 16005 | M | M.Cfr680ORF17970P (98% identity) | M.Csp524ORF16005P | |
| 16010 | 83 aa hypothetical protein | |||
| 19830 | site-specific integrase | |||
| 19835 | M | M.PanLORF19300P (100% identity) | YGGCCR | M.Csp524ORF19835P |
| 19840 | R | Ecos81ORF18545P (100% identity) | YGGCCR | Csp524ORF19835P |
| 19845 | 258 aa hypothetical protein | |||
| 22955 | DNA-binding transcriptional regulator Fis | |||
| 22960 | M | M.Eco9067IV (99% identity) | ATGCAT | M.Csp524ORF22960P |
| 22965 | DUF2556 family protein | |||
| plasmid pRHBSTW-00524_2 | ||||
| 25700 | 76 aa hypothetical protein | |||
| 25705 | M | M.SphSSU5ORF88P (96% identity) | M.Csp524ORF25705P | |
| 25710 | 280 aa hypothetical protein | |||
| plasmid pRHBSTW-00524_3 | ||||
| 25880 | 75 aa hypothetical protein | |||
| 25885 | M | M.Cfr116ORF2880P (99% identity) | M.Csp524ORF25885P | |
| 25890 | 103 aa hypothetical protein | |||
| 25910 | DUF4406 domain-containing protein | |||
| 25915 | M | M.Cfr116ORF2855P (97% identity) | M.Csp524ORF25915P | |
| 25920 | HNH endonuclease | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21800 | type I restriction endonuclease subunit R | |||
| 21805 | R | CbrSOC04GmrSDP (99% identity) | Csp524GmrSDP | |
| 21810 | DUF1127 domain-containing protein | |||