Escherichia coli RHBSTW-00573 |
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Putative Escherichia coli RHBSTW-00573 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
Complete sequence: 5,139,794 bp
GenBank #: CP056396
REBASE acronym: Eco0573
Org_num: 42822
All begin HV238_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5455 | 197 aa hypothetical protein | |||
| 5460 | R | Kqu610ORF5290P (100% identity) | GGANNNNNCTC | Eco0573ORF5470P |
| 5465 | S | S.Ror24150ORF17255P (100% identity) | GGANNNNNCTC | S.Eco0573ORF5470P |
| 5470 | M | M.KpnS1313ORF16435P (98% identity) | GGANNNNNCTC | M.Eco0573ORF5470P |
| 5475 | 87 aa hypothetical protein | |||
| 10560 | 490 aa hypothetical protein | |||
| 10565 | M | M.EcoNW114ORF14015P (100% identity) | M.Eco0573ORF10565P | |
| 10570 | S | S.Sen25333ORF16070P (100% identity) | S.Eco0573ORF10565P | |
| 10575 | DUF91 domain-containing protein | |||
| 10580 | R | Sen25333ORF16070P (53% identity) | Eco0573ORF10565AP | |
| 10585 | IS5-like element ISKpn26 family transposase | |||
| 10590 | R | Sen25333ORF16070P (42% identity) | Eco0573ORF10565BP | |
| 10595 | 56 aa hypothetical protein | |||
| 12805 | IS1 family transposase | |||
| 12810 | M | M.SenSMo01ORF8345P (100% identity) | TCAGNNNNNNTGC | M.Eco0573ORF12810P |
| 12815 | S | S.SenSMo01ORF8345P (100% identity) | TCAGNNNNNNTGC | S.Eco0573ORF12810P |
| 12820 | YecA family protein | |||
| 12825 | R | EcoNW114ORF12045P (97% identity) | TCAGNNNNNNTGC | Eco0573ORF12810P |
| 12830 | site-specific integrase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2080 | cell division protein DamX | |||
| 2085 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco0573DamP |
| 2090 | ribulose-phosphate 3-epimerase | |||
| 2705 | DUF2556 family protein | |||
| 2710 | M | M.EcoW102ORF2375P (100% identity) | ATGCAT | M.Eco0573ORF2710P |
| 2715 | DNA-binding transcriptional regulator Fis | |||
| 3455 | AAA family ATPase | |||
| 3460 | M | M.EcoNW114ORF3515P (100% identity) | M.Eco0573ORF3460P | |
| 3465 | R | EcoNW114ORF3515P (100% identity) | Eco0573ORF3460P | |
| 3470 | YhaC family protein | |||
| 7525 | HNH endonuclease | |||
| 7530 | M | M.Sfl9783ORF5079P (100% identity) | M.Eco0573ORF7530P | |
| 7535 | NinE family protein | |||
| 15230 | drug/metabolite exporter YedA | |||
| 15235 | V | V.SflSTLE1DcmP (100% identity) | V.Eco0573DcmP | |
| 15240 | M | M.EcoNW114DcmP (100% identity) | CCWGG | M.Eco0573DcmP |
| 15245 | phosphohydrolase | |||
| 17490 | NinE family protein | |||
| 17495 | M | M.Sfl9783ORF5079P (100% identity) | M.Eco0573ORF17495P | |
| 17500 | HNH endonuclease | |||
| 20285 | SIR2 family protein | |||
| 20290 | R | Ecos81ORF18545P (100% identity) | YGGCCR | Eco0573ORF20295P |
| 20295 | M | M.PanLORF19300P (100% identity) | YGGCCR | M.Eco0573ORF20295P |
| 20300 | IS3 family transposase | |||
| 21905 | HNH endonuclease | |||
| 21910 | R | EcosNDM5ORF19545P (100% identity) | Eco0573ORF21910P | |
| 21915 | 100 aa hypothetical protein | |||
| 22860 | BREX system P-loop protein BrxC | |||
| 22865 | RM | EcoS1ORF18750P (100% identity) | Eco0573ORF22865P | |
| 22870 | BREX-1 system phosphatase PglZ type A | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20320 | IS66 family transposase | |||
| 20325 | R | Ecos81ORF18685P (99% identity) | VGACAT | Eco0573ORF20330P |
| 20330 | M | M.EcoNIH5II (100% identity) | VGACAT | M.Eco0573ORF20330P |
| 20335 | DUF4391 domain-containing protein | |||