Citrobacter species RHBSTW-00667 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Citrobacter species RHBSTW-00667 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,054,623 bp | CP056361 |
| plasmid pRHBSTW-00667_2: | 297,824 bp | CP056362 |
REBASE acronym: Csp667
Org_num: 42790
All begin HV258_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6410 | ankyrin repeat domain-containing protein | |||
| 6415 | R | EcoXJ62ORF5350P (100% identity) | Csp667ORF6425P | |
| 6420 | S | S.Csp137ORF6645P (99% identity) | S.Csp667ORF6425P | |
| 6425 | M | M.EcoP44ORFBP (100% identity) | M.Csp667ORF6425P | |
| 6430 | transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1735 | cell division protein DamX | |||
| 1740 | M | M.Eco9067DamP (100% identity) | GATC | M.Csp667DamP |
| 1745 | ribulose-phosphate 3-epimerase | |||
| 2295 | DUF2556 family protein | |||
| 2300 | M | M.Csp976ORF2290P (100% identity) | ATGCAT | M.Csp667ORF2300P |
| 2305 | tyrosine-type recombinase/integrase | |||
| 7900 | recombination protein NinG | |||
| 7905 | M | M.Csp976ORF8100P (100% identity) | M.Csp667ORF7905P | |
| 7910 | antitermination protein | |||
| 10110 | phosphohydrolase | |||
| 10115 | M | M.Csp976ORF10220P (100% identity) | CCWGG | M.Csp667ORF10115P |
| 10120 | V | V.Eco9067ORF2227P (100% identity) | V.Csp667ORF10115P | |
| 10125 | drug/metabolite exporter YedA | |||
| 20780 | 149 aa hypothetical protein | |||
| 20785 | R | Csp976ORF21300P (100% identity) | Csp667ORF20785P | |
| 20790 | toprim domain-containing protein | |||
| 21795 | 301 aa hypothetical protein | |||
| 21800 | R | Csp976ORF22390P (100% identity) | Csp667ORF21805P | |
| ??? | M | M.Csp976ORF22390P (100% identity) | M.Csp667ORF21805P | |
| 21810 | tyrosine-type recombinase/integrase | |||
| 22445 | deoxyguanosinetriphosphate triphosphohydrolase | |||
| 22450 | M | M.Kgr634ORF26125P (100% identity) | M.Csp667ORF22450P | |
| 22455 | 8-oxoguanine DNA glycosylase | |||
| plasmid pRHBSTW-00667_2 | ||||
| 24780 | recombinase family protein | |||
| 24785 | R | Sen23701ORF24490P (100% identity) | CCWGG | Csp667ORF24790P |
| 24790 | M | M.SflLIN11ORF24665P (100% identity) | CCWGG | M.Csp667ORF24790P |
| 24795 | IS1 family transposase | |||
| 25040 | DNA polymerase III subunit beta | |||
| 25045 | M | M.Sen3039ORF24445P (100% identity) | M.Csp667ORF25045P | |
| 25050 | 76 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10065 | tail fiber protein | |||
| 10070 | R | Eho161ORFAP (99% identity) | Csp667ORF10075P | |
| 10075 | M | M.Kpn574ORF8305P (100% identity) | M.Csp667ORF10075P | |
| 10080 | SpnT protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20590 | BrnT family toxin | |||
| 20595 | R | CspC21MrrP (100% identity) | Csp667MrrP | |
| 20600 | 46 aa hypothetical protein | |||