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Putative Citrobacter freundii RHBSTW-00302 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
Sequence length: | GenBank #: | |
Chromosome: | 5,099,027 bp | CP056635 |
plasmid pRHBSTW-00302_2: | 204,018 bp | CP056636 |
plasmid pRHBSTW-00302_3: | 118,387 bp | CP056637 |
plasmid pRHBSTW-00302_4: | 104,193 bp | CP056638 |
REBASE acronym: Cfr302
Org_num: 42775
All begin HV147_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
3325 | 615 aa hypothetical protein | |||
3330 | R | KpnZYST1ORF3395P (31% identity) | Cfr302ORF3350BP | |
3335 | IS630-like element ISEc33 family transposase | |||
3340 | R | KpnZYST1ORF3395P (68% identity) | Cfr302ORF3350AP | |
3345 | S | S.FbaZRK30ORF16840P (60% identity) | S.Cfr302ORF3350P | |
3350 | M | M.EliSCF1ORF680P (97% identity) | M.Cfr302ORF3350P | |
3355 | restriction endonuclease subunit S | |||
21675 | toll/interleukin-1 receptor domain-containing | |||
21680 | R | EhoG17ORF4570P (100% identity) | Cfr302ORF21685P | |
21685 | M | M.EhoG17ORF4570P (100% identity) | M.Cfr302ORF21685P | |
21690 | S | S.EhoG17ORF4570P (100% identity) | S.Cfr302ORF21685P | |
21695 | SIR2 family protein | |||
plasmid pRHBSTW-00302_4 | ||||
27080 | ISL3-like element ISSm4 family transposase | |||
27085 | R | SmaY426ORF10P (100% identity) | Cfr302ORF27100P | |
27090 | restriction endonuclease subunit S | |||
27095 | DUF1016 domain-containing protein | |||
27100 | M | M.SmaY426ORF10P (100% identity) | M.Cfr302ORF27100P | |
27105 | ATP-binding protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1705 | cell division protein DamX | |||
1710 | M | M.Eco5172DamP (100% identity) | GATC | M.Cfr302DamP |
1715 | ribulose-phosphate 3-epimerase | |||
2260 | DUF2556 family protein | |||
2265 | M | M.CfrSA79ORF7225P (100% identity) | ATGCAT | M.Cfr302ORF2265P |
2270 | DNA-binding transcriptional regulator Fis | |||
3975 | 177 aa hypothetical protein | |||
3980 | M | M.Cfr6266ORF4080P (98% identity) | M.Cfr302ORF3980P | |
3985 | 182 aa hypothetical protein | |||
6760 | recombination protein NinG | |||
6765 | M | M.Cfri8ORF1246P (94% identity) | M.Cfr302ORF6765P | |
6770 | antitermination protein | |||
9850 | phosphohydrolase | |||
9855 | M | M.Cfrz4ORF9245P (100% identity) | CCWGG | M.Cfr302ORF9855P |
9860 | V | V.CfrMH15ORF11700P (100% identity) | V.Cfr302ORF9855P | |
9865 | drug/metabolite exporter YedA | |||
10405 | conserved phage C-terminal domain-containing | |||
10410 | M | M.Cfr56415ORF3095P (98% identity) | M1.Cfr302ORF10410P | |
10415 | M | M.CfrB38ORF1059P (100% identity) | M2.Cfr302ORF10410P | |
10420 | RusA family crossover junction | |||
14275 | 91 aa hypothetical protein | |||
14280 | M | M.Cfr302ORF17400P (100% identity) | M.Cfr302ORF14280P | |
14285 | 72 aa hypothetical protein | |||
17395 | 91 aa hypothetical protein | |||
17400 | M | M.Cfr302ORF14280P (100% identity) | M.Cfr302ORF17400P | |
17405 | 72 aa hypothetical protein | |||
21470 | HNH endonuclease | |||
21475 | R | Cfr862ORF20900P (100% identity) | Cfr302ORF21475P | |
21480 | IS3 family transposase | |||
plasmid pRHBSTW-00302_2 | ||||
25310 | DNA polymerase III subunit beta | |||
25315 | M | M.Sen3039ORF24445P (100% identity) | M.Cfr302ORF25315P | |
25320 | 76 aa hypothetical protein | |||
plasmid pRHBSTW-00302_3 | ||||
26820 | 76 aa hypothetical protein | |||
26825 | M | M.SphSSU5ORF88P (96% identity) | M.Cfr302ORF26825P | |
26830 | 280 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
21495 | IS3-like element ISSen4 family transposase | |||
21500 | R | CfrSA79ORF15395P (100% identity) | Cfr302ORF21505P | |
21505 | M | M.EcoAH21ORF350P (100% identity) | M.Cfr302ORF21505P | |
21510 | ATP-dependent helicase | |||
Orphan M | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
23965 | 59 aa hypothetical protein | |||
23970 | M | M.SenK61ORFCP (99% identity) | M.Cfr302ORF23970P | |
23975 | 70 aa hypothetical protein |