Escherichia coli RHBSTW-00317 |
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Putative Escherichia coli RHBSTW-00317 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,234,152 bp | CP056613 |
| plasmid pRHBSTW-00317_2: | 146,436 bp | CP056614 |
| plasmid pRHBSTW-00317_3: | 97,721 bp | CP056615 |
REBASE acronym: Eco0317
Org_num: 42808
All begin HV156_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2405 | anti-adapter protein IraM | |||
| 2425 | M | M.EcoW014ORF2420P (100% identity) | A | M.Eco0317ORF2425P |
| 2430 | TrmB family transcriptional regulator | |||
| 4300 | DUF1737 domain-containing protein | |||
| 4320 | M | M.Spn7978ORF3515P (100% identity) | A | M.Eco0317ORF4320P |
| 4325 | TrmB family transcriptional regulator | |||
| 8560 | phage lysis protein EssD | |||
| 8565 | M | M.Sso63633ORF22290P (100% identity) | M.Eco0317ORF8565P | |
| 8570 | 67 aa hypothetical protein | |||
| 8605 | LexA family transcriptional regulator | |||
| 8610 | M | M.EcoW014ORF8310P (100% identity) | GATC | M.Eco0317ORF8610P |
| 8615 | PerC family transcriptional regulator | |||
| 10465 | HNH endonuclease | |||
| 10470 | R | Ecos19ORF20235P (100% identity) | Eco0317ORF10470P | |
| 10475 | 100 aa hypothetical protein | |||
| 15455 | cell division protein DamX | |||
| 15460 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco0317DamP |
| 15465 | ribulose-phosphate 3-epimerase | |||
| 16010 | DUF2556 family protein | |||
| 16015 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco0317ORF16015P |
| 16020 | DNA-binding transcriptional regulator Fis | |||
| 23240 | phosphohydrolase | |||
| 23245 | M | M.Spn7978DcmP (100% identity) | CCWGG | M.Eco0317DcmP |
| 23250 | V | V.SsoST152DcmP (100% identity) | V.Eco0317DcmP | |
| 23255 | drug/metabolite exporter YedA | |||
| plasmid pRHBSTW-00317_2 | ||||
| 25830 | IS110-like element ISShdy1 family transposase | |||
| 25835 | M | M.EcoW014ORF25530P (100% identity) | M.Eco0317ORF25835P | |
| 25840 | 73 aa hypothetical protein | |||
| plasmid pRHBSTW-00317_3 | ||||
| 26790 | IS110-like element ISShdy1 family transposase | |||
| 26795 | M | M.Sso866ORF27155P (100% identity) | M.Eco0317ORF26795P | |
| 26800 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10475 | 100 aa hypothetical protein | |||
| 10480 | R | Ecos19ORF20250P (100% identity) | GAGCC | Eco0317ORF10485P |
| 10485 | M | M.EcoW014ORF10185P (100% identity) | GAGCC | M.Eco0317ORF10485P |
| 10490 | DEAD/DEAH box helicase family protein | |||
| 18340 | 97 aa hypothetical protein | |||
| 18345 | R | Kpn0718ORF815P (100% identity) | ACCACC | Eco0317ORF18350P |
| 18350 | M | M.Kpn0718ORF815P (100% identity) | ACCACC | M.Eco0317ORF18350P |
| 18355 | S8 family peptidase | |||