Citrobacter species RHBSTW-00446 |
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Putative Citrobacter species RHBSTW-00446 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,162,943 bp | CP056508 |
| plasmid pRHBSTW-00446_2: | 281,672 bp | CP056509 |
| plasmid pRHBSTW-00446_4: | 62,128 bp | CP056511 |
REBASE acronym: Csp446
Org_num: 42673
All begin HV199_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5410 | IS1 family transposase | |||
| 5415 | R | EcoCP83ORF15500P (100% identity) | Csp446ORF5425P | |
| 5420 | S | S.Csp859ORF5410P (100% identity) | S.Csp446ORF5425P | |
| 5425 | M | M.Csp859ORF5410P (100% identity) | M.Csp446ORF5425P | |
| 5430 | transposase | |||
| 21275 | 222 aa hypothetical protein | |||
| 21280 | R | Csp859ORF21265AP (100% identity) | Csp446ORF21300BP | |
| 21285 | IS630-like element ISEc33 family transposase | |||
| 21290 | R | Csp859ORF21265BP (100% identity) | Csp446ORF21300AP | |
| 21295 | S | S.Csp859ORF21265P (100% identity) | S.Csp446ORF21300P | |
| 21300 | M | M2.Csp859ORF21265P (100% identity) | M2.Csp446ORF21300P | |
| 21305 | M | M1.Csp859ORF21265P (100% identity) | M1.Csp446ORF21300P | |
| 21310 | helix-turn-helix transcriptional regulator | |||
| plasmid pRHBSTW-00446_4 | ||||
| 28090 | As(III)-sensing metalloregulatory | |||
| 28095 | R | Kmi58ORF30225P (100% identity) | Csp446ORF28105P | |
| 28100 | S | S.Kmi58ORF30225P (100% identity) | S.Csp446ORF28105P | |
| 28105 | M | M.Kmi58ORF30225P (100% identity) | M.Csp446ORF28105P | |
| 28110 | regulatory protein RecX | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1750 | cell division protein DamX | |||
| 1755 | M | M.Eco9067DamP (100% identity) | GATC | M.Csp446DamP |
| 1760 | ribulose-phosphate 3-epimerase | |||
| 2305 | DUF2556 family protein | |||
| 2310 | M | M.Csp859ORF2305P (100% identity) | ATGCAT | M.Csp446ORF2310P |
| 2315 | site-specific integrase | |||
| 7425 | DUF4222 domain-containing protein | |||
| 7430 | M | M.Csp859ORF7400P (100% identity) | M.Csp446ORF7430P | |
| 7435 | TraR/DksA family transcriptional regulator | |||
| 9755 | phosphohydrolase | |||
| 9760 | M | M.Csp859ORF9725P (100% identity) | CCWGG | M.Csp446ORF9760P |
| 9765 | V | V.Csp859ORF9725P (100% identity) | V.Csp446ORF9760P | |
| 9770 | drug/metabolite exporter YedA | |||
| 14730 | 59 aa hypothetical protein | |||
| 14735 | M | M.Csp859ORF14695P (100% identity) | M.Csp446ORF14735P | |
| 14740 | 85 aa hypothetical protein | |||
| 19470 | DUF1317 family protein | |||
| ??? | M | M.Csp859ORF19440P (100% identity) | M.Csp446ORF19475P | |
| 19480 | DUF4060 family protein | |||
| 22345 | 190 aa hypothetical protein | |||
| 22350 | RM | Sma10VA4ORF43590P (100% identity) | GACATC | Csp446ORF22355P |
| 22355 | M | M.Sma10VA4ORF43590P (100% identity) | GACATC | M.Csp446ORF22355P |
| 22360 | acetyltransferase | |||
| 23330 | phage holin family protein | |||
| 23335 | M | M.Csp859ORF23300P (100% identity) | M.Csp446ORF23335P | |
| 23340 | 71 aa hypothetical protein | |||
| 23375 | RusA family crossover junction | |||
| 23380 | M | M1.Csp859ORF23345P (100% identity) | M1.Csp446ORF23380P | |
| 23385 | M | M2.Csp859ORF23345P (100% identity) | M2.Csp446ORF23380P | |
| 23390 | conserved phage C-terminal domain-containing | |||
| 24575 | 197 aa hypothetical protein | |||
| 24580 | M | M.Csp859ORF24535P (100% identity) | M.Csp446ORF24580P | |
| 24585 | replication endonuclease | |||
| 24585 | replication endonuclease | |||
| 24590 | M | M1.Csp859ORF24545P (100% identity) | M1.Csp446ORF24590P | |
| 24595 | 65 aa hypothetical protein | |||
| 24600 | M | M2.Csp859ORF24545P (100% identity) | M2.Csp446ORF24590P | |
| 24605 | 3-5 exonuclease | |||
| plasmid pRHBSTW-00446_2 | ||||
| 26355 | 76 aa hypothetical protein | |||
| 26360 | M | M.Sen3039ORF24445P (100% identity) | M.Csp446ORF26360P | |
| 26365 | DNA polymerase III subunit beta | |||