Citrobacter species RHBSTW-00696 |
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Putative Citrobacter species RHBSTW-00696 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,331,005 bp | CP056341 |
| plasmid pRHBSTW-00696_2: | 251,758 bp | CP056342 |
| plasmid pRHBSTW-00696_3: | 122,594 bp | CP056343 |
| plasmid pRHBSTW-00696_6: | 9,581 bp | CP056346 |
REBASE acronym: Csp696
Org_num: 42675
All begin HV269_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3395 | IS5-like element ISKpn26 family transposase | |||
| 3400 | R | Ero309ORF20880P (100% identity) | Csp696ORF3410P | |
| 3405 | S | S.Ero309ORF20880P (100% identity) | S.Csp696ORF3410P | |
| 3410 | M | M.Ero309ORF20880P (100% identity) | M.Csp696ORF3410P | |
| 3415 | restriction endonuclease subunit S | |||
| 10645 | 375 aa hypothetical protein | |||
| 10650 | M | M.Sma2637ORF25465P (25% identity) | M.Csp696ORF10650AP | |
| 10655 | IS630-like element ISEc33 family transposase | |||
| 10660 | M | M.Cfri0ORF1924P (74% identity) | M.Csp696ORF10650BP | |
| 10665 | S | S.Cfri0ORF1924P (100% identity) | S.Csp696ORF10650P | |
| 10670 | R | Csp1013ORF10605P (100% identity) | Csp696ORF10650P | |
| 10675 | M48 family metallopeptidase | |||
| 21700 | SIR2 family protein | |||
| 21705 | R | ValYM4ORF23620P (98% identity) | Csp696ORF21720P | |
| 21710 | AAA family ATPase | |||
| 21715 | S | S.EcoEA7ORF3705P (82% identity) | S.Csp696ORF21720P | |
| 21720 | M | M.PshCH90ORFCP (99% identity) | M.Csp696ORF21720P | |
| 21725 | WYL domain-containing protein | |||
| 21940 | GTPase | |||
| 21945 | M | M.Csp1013ORF21140P (100% identity) | M.Csp696ORF21945P | |
| 21950 | S | S.Csp1013ORF21140P (90% identity) | S.Csp696ORF21945P | |
| 21955 | R | Csp1013ORF21140P (100% identity) | Csp696ORF21945P | |
| 21960 | endoribonuclease SymE | |||
| 23045 | WYL domain-containing protein | |||
| 23050 | M | M.KspRE03ORF8240P (100% identity) | M.Csp696ORF23050P | |
| 23055 | S | S.KspRE03ORF8240P (100% identity) | S.Csp696ORF23050P | |
| 23060 | R | KspRE03ORF8240P (90% identity) | Csp696ORF23050P | |
| 23065 | IS66 family insertion sequence hypothetical | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1700 | cell division protein DamX | |||
| 1705 | M | M.Eco9067DamP (100% identity) | GATC | M.Csp696DamP |
| 1710 | ribulose-phosphate 3-epimerase | |||
| 2255 | DUF2556 family protein | |||
| 2260 | M | M.Csp16965ORF22660P (100% identity) | ATGCAT | M.Csp696ORF2260P |
| 2265 | tyrosine-type recombinase/integrase | |||
| 4225 | acetyltransferase | |||
| 4230 | M | M.Sma10VA4ORF43590P (100% identity) | GACATC | M.Csp696ORF4230P |
| 4235 | RM | Sma10VA4ORF43590P (100% identity) | GACATC | Csp696ORF4230P |
| 4240 | 190 aa hypothetical protein | |||
| 6760 | recombination protein NinG | |||
| 6765 | M | M.Csp986ORF6525P (98% identity) | M.Csp696ORF6765P | |
| 6770 | antitermination protein | |||
| 7955 | 71 aa hypothetical protein | |||
| 7960 | M | M.Ebaw17ORF13475P (95% identity) | M.Csp696ORF7960P | |
| 7965 | 152 aa hypothetical protein | |||
| 10350 | phosphohydrolase | |||
| 10355 | M | M.Csp1013ORF10340P (100% identity) | CCWGG | M.Csp696ORF10355P |
| 10360 | V | V.Csp524ORF9930P (100% identity) | V.Csp696ORF10355P | |
| 10365 | drug/metabolite exporter YedA | |||
| 22135 | 149 aa hypothetical protein | |||
| 22140 | R | Csp1013ORF21335P (100% identity) | Csp696ORF22140P | |
| 22145 | RES domain-containing protein | |||
| plasmid pRHBSTW-00696_2 | ||||
| 25920 | 76 aa hypothetical protein | |||
| 25925 | M | M.Sen3039ORF24445P (100% identity) | M.Csp696ORF25925P | |
| 25930 | DNA polymerase III subunit beta | |||
| plasmid pRHBSTW-00696_3 | ||||
| 27775 | 76 aa hypothetical protein | |||
| 27780 | M | M.SphSSU5ORF88P (96% identity) | M.Csp696ORF27780P | |
| 27785 | 280 aa hypothetical protein | |||
| plasmid pRHBSTW-00696_6 | ||||
| 28260 | DNA-binding protein | |||
| 28265 | RM | RorNDM5ORF26785P (98% identity) | Csp696ORF28265P | |
| 28270 | mobilization protein MobX | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 15645 | integrase arm-type DNA-binding domain-containing | |||
| 15650 | M | M.Eho8175ORF12025P (99% identity) | ATCACC | M.Csp696ORF15650P |
| 15655 | R | Ror23141ORF13830P (100% identity) | ATCACC | Csp696ORF15650P |
| 15660 | shufflon system plasmid conjugative transfer | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21490 | thioredoxin family protein | |||
| 21495 | R | PvuZN3McrCP (98% identity) | Csp696McrCP | |
| 21500 | R | Kmi409McrBP (99% identity) | Csp696McrBP | |
| 21505 | 250 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24525 | 59 aa hypothetical protein | |||
| 24530 | M | M.EcoNW114ORF23005P (100% identity) | M.Csp696ORF24530P | |
| 24535 | 82 aa hypothetical protein | |||