Citrobacter species RHBSTW-00821 |
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Putative Citrobacter species RHBSTW-00821 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,161,365 bp | CP056321 |
| plasmid pRHBSTW-00821_2: | 283,955 bp | CP056322 |
REBASE acronym: Csp821
Org_num: 42676
All begin HV285_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5415 | IS1 family transposase | |||
| 5420 | R | EcoCP83ORF15500P (100% identity) | Csp821ORF5430P | |
| 5425 | S | S.Csp859ORF5410P (100% identity) | S.Csp821ORF5430P | |
| 5430 | M | M.Csp859ORF5410P (100% identity) | M.Csp821ORF5430P | |
| 5435 | transposase | |||
| 21300 | 222 aa hypothetical protein | |||
| 21305 | R | Csp859ORF21265AP (100% identity) | Csp821ORF21325BP | |
| 21310 | IS630-like element ISEc33 family transposase | |||
| 21315 | R | Csp859ORF21265BP (100% identity) | Csp821ORF21325AP | |
| 21320 | S | S.Csp859ORF21265P (100% identity) | S.Csp821ORF21325P | |
| 21325 | M | M2.Csp859ORF21265P (100% identity) | M2.Csp821ORF21325P | |
| 21330 | M | M1.Csp859ORF21265P (100% identity) | M1.Csp821ORF21325P | |
| 21335 | helix-turn-helix transcriptional regulator | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1760 | cell division protein DamX | |||
| 1765 | M | M.Eco9067DamP (100% identity) | GATC | M.Csp821DamP |
| 1770 | ribulose-phosphate 3-epimerase | |||
| 2315 | DUF2556 family protein | |||
| 2320 | M | M.Csp859ORF2305P (100% identity) | ATGCAT | M.Csp821ORF2320P |
| 2325 | site-specific integrase | |||
| 7435 | DUF4222 domain-containing protein | |||
| 7440 | M | M.Csp859ORF7400P (100% identity) | M.Csp821ORF7440P | |
| 7445 | TraR/DksA family transcriptional regulator | |||
| 9770 | phosphohydrolase | |||
| 9775 | M | M.Csp859ORF9725P (100% identity) | CCWGG | M.Csp821ORF9775P |
| 9780 | V | V.Csp859ORF9725P (100% identity) | V.Csp821ORF9775P | |
| 9785 | drug/metabolite exporter YedA | |||
| 14755 | 59 aa hypothetical protein | |||
| 14760 | M | M.Csp859ORF14695P (100% identity) | M.Csp821ORF14760P | |
| 14765 | 85 aa hypothetical protein | |||
| 19495 | DUF1317 family protein | |||
| ??? | M | M.Csp859ORF19440P (100% identity) | M.Csp821ORF19500P | |
| 19505 | DUF4060 family protein | |||
| 22370 | 190 aa hypothetical protein | |||
| 22375 | RM | Sma10VA4ORF43590P (100% identity) | GACATC | Csp821ORF22380P |
| 22380 | M | M.Sma10VA4ORF43590P (100% identity) | GACATC | M.Csp821ORF22380P |
| 22385 | acetyltransferase | |||
| 23355 | phage holin family protein | |||
| 23360 | M | M.Csp859ORF23300P (100% identity) | M.Csp821ORF23360P | |
| 23365 | 71 aa hypothetical protein | |||
| 23400 | RusA family crossover junction | |||
| 23405 | M | M1.Csp859ORF23345P (100% identity) | M1.Csp821ORF23405P | |
| 23410 | M | M2.Csp859ORF23345P (100% identity) | M2.Csp821ORF23405P | |
| 23415 | conserved phage C-terminal domain-containing | |||
| 24595 | 197 aa hypothetical protein | |||
| 24600 | M | M.Csp859ORF24535P (100% identity) | M.Csp821ORF24600P | |
| 24605 | replication endonuclease | |||
| 24605 | replication endonuclease | |||
| 24610 | M | M1.Csp859ORF24545P (100% identity) | M1.Csp821ORF24610P | |
| 24615 | 65 aa hypothetical protein | |||
| 24620 | M | M2.Csp859ORF24545P (100% identity) | M2.Csp821ORF24610P | |
| 24625 | 3-5 exonuclease | |||
| plasmid pRHBSTW-00821_2 | ||||
| 26385 | 76 aa hypothetical protein | |||
| 26390 | M | M.Sen3039ORF24445P (100% identity) | M.Csp821ORF26390P | |
| 26395 | DNA polymerase III subunit beta | |||