Escherichia coli RHBSTW-00822 |
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Putative Escherichia coli RHBSTW-00822 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,133,535 bp | CP056315 |
| plasmid pRHBSTW-00822_2: | 88,905 bp | CP056316 |
| plasmid pRHBSTW-00822_3: | 55,918 bp | CP056317 |
REBASE acronym: Eco822
Org_num: 42690
All begin HV286_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17170 | endoribonuclease SymE | |||
| 17175 | R | EcosS9ORF3165P (100% identity) | RTACNNNNGTG | Eco822ORF17185P |
| 17180 | S | S.EcosS9ORF3165P (100% identity) | RTACNNNNGTG | S.Eco822ORF17185P |
| 17185 | M | M.EcosS9ORF3165P (100% identity) | RTACNNNNGTG | M.Eco822ORF17185P |
| 17190 | restriction endonuclease | |||
| 19240 | ash family protein | |||
| 19245 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.Eco822ORF19250P |
| 19250 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.Eco822ORF19250P |
| 19255 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | Eco822ORF19250P |
| 19260 | type IV toxin-antitoxin system AbiEi family | |||
| plasmid pRHBSTW-00822_2 | ||||
| 25070 | IS6-like element IS26 family transposase | |||
| 25075 | M | M.SenBR076ORFFP (29% identity) | CAAYNNNNNCTGG | M.Eco822ORF25075P |
| 25080 | S | S.SenBR076ORFFP (100% identity) | CAAYNNNNNCTGG | S.Eco822ORF25075P |
| 25085 | R | KpnKPH1ORF27575P (100% identity) | CAAYNNNNNCTGG | Eco822ORF25075P |
| 25090 | IS1 family transposase | |||
| 25485 | IS6-like element IS26 family transposase | |||
| 25490 | M | M.SflFF34ORF9300P (71% identity) | M.Eco822ORF25490P | |
| 25495 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3685 | drug/metabolite exporter YedA | |||
| 3690 | V | V.SflC32DcmP (74% identity) | V.Eco822DcmP | |
| 3695 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.Eco822DcmP |
| 3700 | phosphohydrolase | |||
| 6050 | 71 aa hypothetical protein | |||
| 6055 | M | M.KaeCRE8ORF15605P (100% identity) | M.Eco822ORF6055P | |
| 6060 | helix-turn-helix domain-containing protein | |||
| 11115 | DNA-binding transcriptional regulator Fis | |||
| 11120 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco822ORF11120P |
| 11125 | DUF2556 family protein | |||
| 11715 | ribulose-phosphate 3-epimerase | |||
| 11720 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco822DamP |
| 11725 | cell division protein DamX | |||
| 16810 | helix-turn-helix domain-containing protein | |||
| 16815 | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M1.Eco822ORF16815P |
| 16820 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.Eco822ORF16815P |
| 16825 | R | EcosEC4ORF20110P (32% identity) | GGTCTC | Eco822ORF16815BP |
| 16830 | ATP-binding protein | |||
| 16835 | IS21-like element ISEc12 family transposase | |||
| 16840 | R | EcosEC21ORF19520P (67% identity) | GGTCTC | Eco822ORF16815AP |
| 16845 | McrC family protein | |||
| 17375 | PerC family transcriptional regulator | |||
| 17380 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco822ORF17380P |
| 17385 | LexA family transcriptional regulator | |||
| 22710 | 71 aa hypothetical protein | |||
| 22715 | M | M.KpnYN1ORFGP (89% identity) | M.Eco822ORF22715P | |
| 22720 | helix-turn-helix transcriptional regulator | |||
| 24965 | TrmB family transcriptional regulator | |||
| 24970 | M | M.EcosS9ORF10680P (100% identity) | A | M.Eco822ORF24970P |
| 24985 | DUF3927 family protein | |||
| plasmid pRHBSTW-00822_2 | ||||
| 25140 | 102 aa hypothetical protein | |||
| 25145 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.Eco822ORF25145P |
| 25150 | 73 aa hypothetical protein | |||
| plasmid pRHBSTW-00822_3 | ||||
| 25650 | EAL domain-containing protein | |||
| 25655 | R | YpsR1ORFAP (100% identity) | CCWGG | Eco822ORF25660P |
| 25660 | M | M.SflLIN11ORF24665P (100% identity) | CCWGG | M.Eco822ORF25660P |
| 25665 | IS1 family transposase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16840 | Alw26I/Eco31I/Esp3I family type II restriction | |||
| 16845 | R | EcosS9McrCP (100% identity) | Eco822McrCP | |
| 16850 | R | EcosS9McrBP (92% identity) | Eco822McrBP | |
| 16855 | IS3-like element ISEc52 family transposase | |||