Escherichia coli RHBSTW-00860 |
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Putative Escherichia coli RHBSTW-00860 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,267,817 bp | CP056282 |
| plasmid pRHBSTW-00860_2: | 97,488 bp | CP056283 |
REBASE acronym: Eco860
Org_num: 42693
All begin HV303_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18060 | endoribonuclease SymE | |||
| 18065 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | Eco860ORF18075P |
| 18070 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.Eco860ORF18075P |
| 18075 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.Eco860ORF18075P |
| 18080 | restriction endonuclease | |||
| 19880 | ash family protein | |||
| 19885 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.Eco860ORF19890P |
| 19890 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.Eco860ORF19890P |
| 19895 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | Eco860ORF19890P |
| 19900 | type IV toxin-antitoxin system AbiEi family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3740 | drug/metabolite exporter YedA | |||
| 3745 | V | V.SflC32DcmP (74% identity) | V.Eco860DcmP | |
| 3750 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.Eco860DcmP |
| 3755 | phosphohydrolase | |||
| 7130 | PerC family transcriptional regulator | |||
| 7135 | M | M.EcoST131bORFEP (100% identity) | M.Eco860ORF7135P | |
| 7140 | serine/threonine protein phosphatase | |||
| 11435 | DNA-binding transcriptional regulator Fis | |||
| 11440 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco860ORF11440P |
| 11445 | DUF2556 family protein | |||
| 12035 | ribulose-phosphate 3-epimerase | |||
| 12040 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco860DamP |
| 12045 | cell division protein DamX | |||
| 16430 | conjugal transfer protein TraG N-terminal | |||
| 16435 | M | M.EcosS3ORF15775P (100% identity) | M.Eco860ORF16435P | |
| 16440 | R | EcosS3ORF15775P (100% identity) | Eco860ORF16435P | |
| 16445 | 555 aa hypothetical protein | |||
| 17725 | helix-turn-helix domain-containing protein | |||
| 17730 | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M1.Eco860ORF17730P |
| 17735 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.Eco860ORF17730P |
| 17740 | R | EcosS9ORF2810P (100% identity) | GGTCTC | Eco860ORF17730P |
| 17745 | McrC family protein | |||
| 23355 | 71 aa hypothetical protein | |||
| 23360 | M | M.KpnYN1ORFGP (89% identity) | M.Eco860ORF23360P | |
| 23365 | helix-turn-helix transcriptional regulator | |||
| 25630 | TrmB family transcriptional regulator | |||
| 25635 | M | M.EcosS9ORF10680P (100% identity) | A | M.Eco860ORF25635P |
| 25650 | DUF3927 family protein | |||
| plasmid pRHBSTW-00860_2 | ||||
| 25955 | 102 aa hypothetical protein | |||
| 25960 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.Eco860ORF25960P |
| 25965 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17740 | Alw26I/Eco31I/Esp3I family type II restriction | |||
| 17745 | R | EcosS9McrCP (100% identity) | Eco860McrCP | |
| 17750 | R | EcosS3McrBP (100% identity) | Eco860McrBP | |
| 17755 | glycosyltransferase family 2 protein | |||