Escherichia coli RHBSTW-00875 |
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Putative Escherichia coli RHBSTW-00875 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,327,530 bp | CP056273 |
| plasmid pRHBSTW-00875_2: | 139,002 bp | CP056274 |
REBASE acronym: Eco875
Org_num: 42695
All begin HV309_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16665 | IS66 family insertion sequence hypothetical | |||
| 16670 | M | M.EcosS1ORF17110P (100% identity) | M.Eco875ORF16670P | |
| 16675 | S | S.EcosS1ORF17110P (100% identity) | S.Eco875ORF16670P | |
| 16680 | R | EcosEC2ORF13930P (100% identity) | Eco875ORF16670P | |
| 16685 | 75 aa hypothetical protein | |||
| 22045 | restriction endonuclease | |||
| 22050 | M | M.Ecost88ORF20845P (100% identity) | GGYANNNNNGTNG | M.Eco875ORF22050P |
| 22055 | S | S.Ecost88ORF20845P (100% identity) | GGYANNNNNGTNG | S.Eco875ORF22050P |
| 22060 | R | Ecost88ORF20845P (100% identity) | GGYANNNNNGTNG | Eco875ORF22050P |
| 22065 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 560 | transposase | |||
| 565 | M | M.SflFF80ORF21000P (100% identity) | YGGCCR | M.Eco875ORF565P |
| 570 | R | SflFF80ORF21000P (100% identity) | YGGCCR | Eco875ORF565P |
| 575 | transposase | |||
| 2235 | cell division protein DamX | |||
| 2240 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco875DamP |
| 2245 | ribulose-phosphate 3-epimerase | |||
| 2770 | DUF2556 family protein | |||
| 2775 | M | M.Sdy12039ORFBP (100% identity) | ATGCAT | M.Eco875ORF2775P |
| 2780 | DNA-binding transcriptional regulator Fis | |||
| 10230 | phosphohydrolase | |||
| 10235 | M | M.Ecos135DcmP (100% identity) | CCWGG | M.Eco875DcmP |
| 10240 | V | V.SflFF64DcmP (100% identity) | V.Eco875DcmP | |
| 10245 | drug/metabolite exporter YedA | |||
| 14945 | LexA family transcriptional regulator | |||
| 14950 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco875ORF14950P |
| 14955 | PerC family transcriptional regulator | |||
| plasmid pRHBSTW-00875_2 | ||||
| 26390 | 73 aa hypothetical protein | |||
| 26395 | M | M.Sfl2142ORF380P (100% identity) | M.Eco875ORF26395P | |
| 26400 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14740 | isocitrate dehydrogenase | |||
| 14745 | R | EfeEF02ORF213200P (100% identity) | YCGR | Eco875ORF14745P |
| 14750 | site-specific DNA recombinase | |||