Citrobacter species RHBSTW-00887 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Citrobacter species RHBSTW-00887 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,327,400 bp | CP056267 |
| plasmid pRHBSTW-00887_2: | 298,088 bp | CP056268 |
REBASE acronym: Csp0887
Org_num: 42664
All begin HV314_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4285 | 53 aa hypothetical protein | |||
| 4290 | S | S.Kmi166ORF21725P (100% identity) | S.Csp0887ORF4305P | |
| 4295 | AAA family ATPase | |||
| 4300 | 264 aa hypothetical protein | |||
| 4305 | M | M.Kmi166ORF21725P (100% identity) | M.Csp0887ORF4305P | |
| 4310 | 295 aa hypothetical protein | |||
| 10830 | 388 aa hypothetical protein | |||
| 10835 | M | M.CyoCF10ORF9780P (100% identity) | M.Csp0887ORF10835P | |
| 10840 | S | S.CyoCF10ORF9780P (100% identity) | S.Csp0887ORF10835P | |
| 10845 | YecA family protein | |||
| 10850 | R | Cbr1b1ORF16305P (99% identity) | Csp0887ORF10835P | |
| 10855 | M48 family metallopeptidase | |||
| 21830 | IS110-like element IS4321 family transposase | |||
| 21835 | R | Cbr1b1ORF3220P (100% identity) | Csp0887ORF21840P | |
| 21840 | M | M.Cbr1b1ORF3220P (100% identity) | M.Csp0887ORF21840P | |
| 21845 | S | S2.Cbr1b1ORF3220P (71% identity) | S.Csp0887ORF21840P | |
| 21850 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 430 | DUF262 domain-containing protein | |||
| 435 | RM | Cpo85039ORF1065P (100% identity) | Csp0887ORF435P | |
| 440 | 133 aa hypothetical protein | |||
| 445 | Reverse transcriptase | |||
| 450 | RM | Cpo85039ORF1080P (100% identity) | Csp0887ORF450P | |
| 455 | BREX-1 system phosphatase PglZ type A | |||
| 1735 | cell division protein DamX | |||
| 1740 | M | M.Eco9067DamP (100% identity) | GATC | M.Csp0887DamP |
| 1745 | ribulose-phosphate 3-epimerase | |||
| 2280 | DUF2556 family protein | |||
| 2285 | M | M.Csp976ORF2290P (99% identity) | ATGCAT | M.Csp0887ORF2285P |
| 2290 | tyrosine-type recombinase/integrase | |||
| 4505 | acetyltransferase | |||
| 4510 | M | M.Sma10VA4ORF43590P (100% identity) | GACATC | M.Csp0887ORF4510P |
| 4515 | RM | Sma10VA4ORF43590P (100% identity) | GACATC | Csp0887ORF4510P |
| 4520 | 190 aa hypothetical protein | |||
| 7310 | chromosome partitioning protein ParB | |||
| 7315 | M | M.Cbr1b1ORF12765P (99% identity) | M.Csp0887ORF7315P | |
| 7320 | DUF1317 family protein | |||
| 10540 | phosphohydrolase | |||
| 10545 | M | M.Cbr1b1ORF16005P (100% identity) | CCWGG | M.Csp0887ORF10545P |
| 10550 | V | V.Eco9067ORF2227P (100% identity) | V.Csp0887ORF10545P | |
| 10555 | drug/metabolite exporter YedA | |||
| 21810 | HNH endonuclease | |||
| 21815 | R | Cbr1b1ORF2005P (99% identity) | Csp0887ORF21815P | |
| 21820 | HNH endonuclease | |||
| plasmid pRHBSTW-00887_2 | ||||
| 25735 | 76 aa hypothetical protein | |||
| 25740 | M | M.Sen3039ORF24445P (100% identity) | M.Csp0887ORF25740P | |
| 25745 | DNA polymerase III subunit beta | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pRHBSTW-00887_2 | ||||
| 25540 | recombinase family protein | |||
| 25550 | M | M.Pvu49741ORF10700P (43% identity) | M.Csp0887ORF25550P | |
| 25555 | LysR family transcriptional regulator | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24355 | 59 aa hypothetical protein | |||
| 24360 | M | M.EcoNW114ORF23005P (100% identity) | M.Csp0887ORF24360P | |
| 24365 | 82 aa hypothetical protein | |||