Citrobacter species RHBSTW-00903 |
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Putative Citrobacter species RHBSTW-00903 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,310,160 bp | CP056251 |
| plasmid pRHBSTW-00903_2: | 155,385 bp | CP056252 |
| plasmid pRHBSTW-00903_3: | 71,960 bp | CP056253 |
REBASE acronym: Csp887
Org_num: 42572
All begin HV320_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1725 | cell division protein DamX | |||
| 1730 | M | M.Eco9067DamP (100% identity) | GATC | M.Csp887DamP |
| 1735 | ribulose-phosphate 3-epimerase | |||
| 2285 | DUF2556 family protein | |||
| 2290 | M | M.Csp976ORF2290P (100% identity) | ATGCAT | M.Csp887ORF2290P |
| 2295 | tyrosine-type recombinase/integrase | |||
| 6210 | recombination protein NinG | |||
| 6215 | M | M.Csp986ORF6525P (98% identity) | M1.Csp887ORF6215P | |
| 6220 | antitermination protein | |||
| 6225 | M | M2.Cyo13708ORF1399P (97% identity) | M2.Csp887ORF6215P | |
| 6230 | phage holin, lambda family | |||
| 7540 | recombination protein NinG | |||
| 7545 | M | M.Csp424ORF7385P (100% identity) | M.Csp887ORF7545P | |
| 7550 | antitermination protein | |||
| 10160 | phosphohydrolase | |||
| 10165 | M | M.CspTSA1ORF9545P (100% identity) | CCWGG | M.Csp887ORF10165P |
| 10170 | V | V.Eco9067ORF2227P (100% identity) | V.Csp887ORF10165P | |
| 10175 | drug/metabolite exporter YedA | |||
| 10475 | 147 aa hypothetical protein | |||
| 10480 | M | M.Cpo64ACORF21795P (97% identity) | M.Csp887ORF10480P | |
| 10485 | 72 aa hypothetical protein | |||
| 11360 | DNA polymerase III subunit beta | |||
| 11365 | M | M.Sen3039ORF24445P (100% identity) | M.Csp887ORF11365P | |
| 11370 | 76 aa hypothetical protein | |||
| 12590 | DUF4222 domain-containing protein | |||
| 12595 | M | M2.Csp678ORF15885P (82% identity) | M.Csp887ORF12595P | |
| 12600 | TraR/DksA C4-type zinc finger protein | |||
| 15670 | 921 aa hypothetical protein | |||
| 15675 | M | M.PdiESL4ORF7880P (100% identity) | M.Csp887ORF15675P | |
| 15680 | alpha/beta hydrolase | |||
| 22865 | 149 aa hypothetical protein | |||
| 22870 | R | Csp976ORF21300P (100% identity) | Csp887ORF22870P | |
| 22875 | toprim domain-containing protein | |||
| 23895 | 301 aa hypothetical protein | |||
| 23900 | R | Csp976ORF22390P (100% identity) | Csp887ORF23905P | |
| ??? | M | M.Csp976ORF22390P (100% identity) | M.Csp887ORF23905P | |
| 23910 | 86 aa hypothetical protein | |||
| plasmid pRHBSTW-00903_2 | ||||
| 26675 | AAA family ATPase | |||
| 26680 | M | M.Kpn3892ORF26955P (100% identity) | CCWGG | M.Csp887ORF26680P |
| 26685 | R | Kpn9645ORFAP (100% identity) | CCWGG | Csp887ORF26680P |
| 26690 | tyrosine-type recombinase/integrase | |||
| 26710 | SOS response-associated peptidase family | |||
| 26715 | M | M.Kpni11ayORF5166P (100% identity) | M.Csp887ORF26715P | |
| 26720 | 73 aa hypothetical protein | |||
| plasmid pRHBSTW-00903_3 | ||||
| 27105 | acetyltransferase | |||
| 27110 | M | M.Sma10VA4ORF43590P (100% identity) | GACATC | M.Csp887ORF27110P |
| 27115 | RM | Sma10VA4ORF43590P (100% identity) | GACATC | Csp887ORF27110P |
| 27120 | 190 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10100 | shufflon system plasmid conjugative transfer | |||
| 10105 | R | Eco761ORFBP (100% identity) | CCGAG | Csp887ORF10110P |
| 10110 | M | M.KquC3001ORF9710P (100% identity) | CCGAG | M.Csp887ORF10110P |
| 10115 | SpnT protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22675 | BrnT family toxin | |||
| 22680 | R | CspC21MrrP (100% identity) | Csp887MrrP | |
| 22685 | 46 aa hypothetical protein | |||