Escherichia coli C7 |
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Putative Escherichia coli C7 RM systems
Ref: Bitar,I. unpublished
REBASE ref # 28497
| Sequence length: | GenBank #: | |
| Chromosome: | 4,998,812 bp | CP059279 |
| plasmid pC7: | 141,169 bp | CP059280 |
REBASE acronym: EcoC7B
Org_num: 42577
All begin H0271_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 430 | AAA family ATPase | |||
| 435 | S | S.SflN116ORF3940P (100% identity) | CAAYNNNNNCTGC | S.EcoC7BORF440P |
| 440 | M | M.SflN116ORF3940P (100% identity) | CAAYNNNNNCTGC | M.EcoC7BORF440P |
| 445 | R | EcoCase6ORF480P (100% identity) | CAAYNNNNNCTGC | EcoC7BORF440P |
| 450 | MmcB family DNA repair protein | |||
| 6470 | ash family protein | |||
| 6475 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoC7BORF6480P |
| 6480 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoC7BORF6480P |
| 6485 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoC7BORF6480P |
| 6490 | type IV toxin-antitoxin system AbiEi family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4005 | 97 aa hypothetical protein | |||
| 4010 | R | Ecos19ORF20635P (100% identity) | EcoC7BORF4010P | |
| 4015 | 607 aa hypothetical protein | |||
| 4020 | ATP-binding protein | |||
| 4025 | M | M.Sen5773ORF4471P (100% identity) | RCCGGY | M.EcoC7BORF4025P |
| 4030 | 174 aa hypothetical protein | |||
| 4285 | helix-turn-helix domain-containing protein | |||
| 4290 | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M1.EcoC7BORF4290P |
| 4295 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoC7BORF4290P |
| 4300 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoC7BORF4290P |
| 4305 | McrC family protein | |||
| 14765 | drug/metabolite exporter YedA | |||
| 14770 | V | V.SflC32DcmP (74% identity) | V.EcoC7BDcmP | |
| 14775 | M | M.SflC32DcmP (100% identity) | CCWGG | M.EcoC7BDcmP |
| 14780 | phosphohydrolase | |||
| 22370 | DNA-binding transcriptional regulator Fis | |||
| 22375 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoC7BORF22375P |
| 22380 | DUF2556 family protein | |||
| 22970 | ribulose-phosphate 3-epimerase | |||
| 22975 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoC7BDamP |
| 22980 | cell division protein DamX | |||
| plasmid pC7 | ||||
| 24100 | 102 aa hypothetical protein | |||
| 24105 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoC7BORF24105P |
| 24110 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4300 | Alw26I/Eco31I/Esp3I family type II restriction | |||
| 4305 | R | EcosS9McrCP (100% identity) | EcoC7BMcrCP | |
| 4310 | R | EcosS3McrBP (100% identity) | EcoC7BMcrBP | |
| 4315 | glycosyltransferase family 2 protein | |||