Citrobacter species RHBSTW-00944 |
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Putative Citrobacter species RHBSTW-00944 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
Complete sequence: 5,145,831 bp
GenBank #: CP055418
REBASE acronym: Csp944
Org_num: 42119
All begin HV334_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1955 | IS1 family transposase | |||
| 1960 | R | EcoBL08ORF9090P (85% identity) | Csp944ORF1960P | |
| 1965 | transposase | |||
| 3265 | DUF262 domain-containing protein | |||
| 3270 | R | Csp229ORF4020P (100% identity) | Csp944ORF3280P | |
| 3275 | S | S.Csp229ORF4020P (100% identity) | S.Csp944ORF3280P | |
| 3280 | M | M.Csp229ORF4020P (100% identity) | M.Csp944ORF3280P | |
| 3285 | GTPase | |||
| 5260 | ankyrin repeat domain-containing protein | |||
| 5265 | R | Eco2001CCORF9710P (100% identity) | Csp944ORF5275P | |
| 5270 | S | S.EcoK2921ORF5280P (99% identity) | S.Csp944ORF5275P | |
| 5275 | M | M.Kpn80147ORFIP (97% identity) | M.Csp944ORF5275P | |
| 5280 | transposase | |||
| 6970 | 199 aa hypothetical protein | |||
| 6975 | R | CfrPSVORF1427P (96% identity) | Csp944ORF6990P | |
| 6980 | DUF262 domain-containing protein | |||
| 6985 | S | S.Hne2ORF613P (55% identity) | S.Csp944ORF6990P | |
| 6990 | M | M.Cfr714ORF6505P (96% identity) | M.Csp944ORF6990P | |
| 6995 | IS66 family insertion sequence hypothetical | |||
| 7515 | PD-(D/E)XK nuclease family protein | |||
| 7520 | R | Csp229ORF17030P (100% identity) | Csp944ORF7525P | |
| 7525 | M | M.Csp229ORF17030P (100% identity) | M.Csp944ORF7525P | |
| 7530 | S | S.Csp229ORF17030P (100% identity) | S.Csp944ORF7525P | |
| 7535 | nuclease | |||
| 21255 | IS5-like element ISKpn26 family transposase | |||
| 21260 | R | Csp986ORF6055P (99% identity) | Csp944ORF21260P | |
| 21265 | HigA family addiction module antidote protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 600 | 3-5 exoribonuclease | |||
| ??? | M | M.Eco11122ORF4401P (100% identity) | M.Csp944ORF605P | |
| 610 | 94 aa hypothetical protein | |||
| 5930 | TraR/DksA family transcriptional regulator | |||
| 5935 | M | M.SenFB23ORF3140P (98% identity) | M.Csp944ORF5935P | |
| 5940 | replication endonuclease | |||
| 7660 | recombination protein NinG | |||
| 7665 | M | M.CfrSK3ORF7330P (100% identity) | M.Csp944ORF7665P | |
| 7670 | antitermination protein | |||
| 8625 | conserved phage C-terminal domain-containing | |||
| 8630 | M | M.CgiC3ORF24720P (97% identity) | M.Csp944ORF8630P | |
| 8635 | RusA family crossover junction | |||
| 10035 | phosphohydrolase | |||
| 10040 | M | M.Csp229ORF14950P (100% identity) | CCWGG | M.Csp944ORF10040P |
| 10045 | V | V.Csp229ORF14950P (100% identity) | V.Csp944ORF10040P | |
| 10050 | drug/metabolite exporter YedA | |||
| 10660 | 100 aa hypothetical protein | |||
| 10665 | M | M.CfrF3221ORF11555P (100% identity) | M.Csp944ORF10665P | |
| 10670 | 114 aa hypothetical protein | |||
| 10730 | conserved phage C-terminal domain-containing | |||
| 10735 | M | M.SenRM019ORF5435P (99% identity) | M.Csp944ORF10735P | |
| 10740 | RusA family crossover junction | |||
| 19495 | DGQHR domain-containing protein | |||
| ??? | M | M.Eho56ORF4285P (95% identity) | M.Csp944ORF19500P | |
| 19505 | DUF4060 family protein | |||
| 22230 | DNA-binding transcriptional regulator Fis | |||
| 22235 | M | M.Csp229ORF22615P (100% identity) | ATGCAT | M.Csp944ORF22235P |
| 22240 | DUF2556 family protein | |||
| 22785 | ribulose-phosphate 3-epimerase | |||
| 22790 | M | M.Eco9067DamP (100% identity) | GATC | M.Csp944DamP |
| 22795 | cell division protein DamX | |||