Escherichia coli RHB05-C24 |
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Putative Escherichia coli RHB05-C24 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,386,486 bp | CP055761 |
| plasmid pRHB05-C24_3: | 67,764 bp | CP055763 |
| plasmid pRHB05-C24_4: | 67,142 bp | CP055764 |
| plasmid unnamed: | 422,523 bp | CP055762 |
REBASE acronym: Eco05C24
Org_num: 42133
All begin HVV89_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1730 | cell division protein DamX | |||
| 1735 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco05C24DamP |
| 1740 | ribulose-phosphate 3-epimerase | |||
| 2285 | DUF2556 family protein | |||
| 2290 | M | M.Ecostr16ORFAP (100% identity) | ATGCAT | M.Eco05C24ORF2290P |
| 2295 | DNA-binding transcriptional regulator Fis | |||
| 8915 | TrmB family transcriptional regulator | |||
| 8920 | M | M.Eco42C22ORF1045P (100% identity) | M.Eco05C24ORF8920P | |
| 8930 | holin | |||
| 16185 | LexA family transcriptional regulator | |||
| 16190 | M | M.SflLIN17ORF20615P (100% identity) | GATC | M.Eco05C24ORF16190P |
| 16195 | PerC family transcriptional regulator | |||
| 18110 | HNH endonuclease | |||
| 18115 | R | EcosB2CORFAP (100% identity) | Eco05C24ORF18115P | |
| 18120 | 100 aa hypothetical protein | |||
| plasmid pRHB05-C24_3 | ||||
| 23330 | 97 aa hypothetical protein | |||
| 23335 | M | M.Sen527ORF25750P (100% identity) | M.Eco05C24ORF23335P | |
| 23340 | 73 aa hypothetical protein | |||
| plasmid pRHB05-C24_4 | ||||
| 23750 | 102 aa hypothetical protein | |||
| 23755 | M | M.Eco746ORF25930P (100% identity) | M.Eco05C24ORF23755P | |
| 23760 | 73 aa hypothetical protein | |||
| plasmid unnamed | ||||
| 23140 | drug/metabolite exporter YedA | |||
| 23145 | V | V.SsoSE61DcmP (100% identity) | V.Eco05C24DcmP | |
| 23150 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco05C24DcmP |
| 23155 | phosphohydrolase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18120 | 100 aa hypothetical protein | |||
| 18125 | R | EcoXJ51ORF19525P (100% identity) | GAGCC | Eco05C24ORF18130P |
| 18130 | M | M.EcoM8ORF4405P (99% identity) | GAGCC | M.Eco05C24ORF18130P |
| 18135 | DEAD/DEAH box helicase family protein | |||