Escherichia coli OP50 |
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Putative Escherichia coli OP50 RM systems
Ref: Fierst,J.L. et al. unpublished
REBASE ref # 30926
Complete sequence: 4,544,642 bp
GenBank #: CP059137
REBASE acronym: EcoOP50
Org_num: 41980
All begin HF087_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 570 | adenine/cytosine-specific restriction | |||
| 575 | R | Msa17ORFC2P (98% identity) | TGANNNNNNNNTGCT | EcoOP50ORF580P |
| 580 | M | M.SenHNK130ORF17125P (100% identity) | TGANNNNNNNNTGCT | M.EcoOP50ORF580P |
| ??? | S | S.Eco606ORF4215P (95% identity) | TGANNNNNNNNTGCT | S.EcoOP50ORF580P |
| 590 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5510 | cell division protein DamX | |||
| 5515 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoOP50DamP |
| 5520 | ribulose-phosphate 3-epimerase | |||
| 6145 | DUF2556 family protein | |||
| 6150 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoOP50ORF6150P |
| 6155 | DNA-binding transcriptional regulator Fis | |||
| 11530 | helix-turn-helix domain-containing protein | |||
| 11535 | R | Ssp28760ORF14350P (100% identity) | RCSRC | EcoOP50ORF11535P |
| 11540 | transcription factor | |||
| 17625 | replication endonuclease | |||
| 17630 | M | M.EcosBORF4330P (100% identity) | M.EcoOP50ORF17630P | |
| 17635 | TraR/DksA family transcriptional regulator | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 565 | GTPase | |||
| 570 | R | SenHNK130MrrP (100% identity) | EcoOP50MrrP | |
| 575 | type I restriction-modification system | |||
| 590 | endoribonuclease SymE | |||
| 595 | R | SenHNK130McrBP (100% identity) | EcoOP50McrBP | |
| 600 | R | SenHNK130McrCP (100% identity) | EcoOP50McrCP | |
| 605 | DUF1998 domain-containing protein | |||