Escherichia coli WP2-S18-ESBL-08 |
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Putative Escherichia coli WP2-S18-ESBL-08 RM systems
Ref: Sekizuka,T. et al. unpublished
REBASE ref # 30911
| Sequence length: | GenBank #: | |
| Chromosome: | 5,130,684 bp | AP021946 |
| plasmid pWP2-S18-ESBL-08_2: | 91,630 bp | AP021948 |
REBASE acronym: EcoBL08
Org_num: 41986
All begin WP2S18E08_, WP2S18E08_P
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6980 | 221 aa hypothetical protein | |||
| 6990 | R | KpnB31ORF722P (100% identity) | EcoBL08ORF7040P | |
| 7000 | S | S.KpnB31ORF722P (67% identity) | S2.EcoBL08ORF7040P | |
| 7010 | 125 aa hypothetical protein | |||
| 7020 | repressor TnpA | |||
| 7030 | S | S.KpnB31ORF722P (14% identity) | S1.EcoBL08ORF7040P | |
| 7040 | M | M.KpnB31ORF722P (100% identity) | M.EcoBL08ORF7040P | |
| 7050 | 290 aa hypothetical protein | |||
| 8780 | 150 aa hypothetical protein | |||
| 8790 | M | M.SflN101ORF19075P (94% identity) | M.EcoBL08ORF8790P | |
| 8800 | S | S.SflN101ORF19075P (100% identity) | S.EcoBL08ORF8790P | |
| 8810 | 43 aa hypothetical protein | |||
| 9080 | IS5 family transposase | |||
| 9090 | M | M.EcoM9754ORF41110P (100% identity) | M.EcoBL08ORF9090P | |
| 9100 | R | EcoM9754ORF41110P (100% identity) | EcoBL08ORF9090P | |
| 9110 | 129 aa hypothetical protein | |||
| 40510 | restriction endonuclease | |||
| 40520 | R | Ecoo241ORF21620P (100% identity) | AACNNNNNNGTGC | EcoBL08ORF40530P |
| 40530 | M | M.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | M.EcoBL08ORF40530P |
| 40540 | S | S.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | S.EcoBL08ORF40530P |
| 40550 | endoribonuclease SymE | |||
| 43310 | 188 aa hypothetical protein | |||
| 43320 | S | S.EcoOr019ORF22085P (100% identity) | S.EcoBL08ORF43330P | |
| 43330 | M | M.EcosEC2ORF410P (100% identity) | M.EcoBL08ORF43330P | |
| 43340 | R | EcoOr019ORF22085P (100% identity) | EcoBL08ORF43330P | |
| 43350 | transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3210 | cell division protein DamX | |||
| 3220 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoBL08DamP |
| 3230 | ribulose-phosphate 3-epimerase | |||
| 4400 | 59 aa hypothetical protein | |||
| 4410 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.EcoBL08ORF4410P |
| 4420 | DNA-binding protein Fis | |||
| 8240 | alkaline phosphatase | |||
| 8250 | RM | Kpn5617ORF27875P (100% identity) | EcoBL08ORF8250P | |
| 8260 | 1213 aa hypothetical protein | |||
| 15080 | replication protein | |||
| 15090 | M | M.KpnLH102AORF6435P (100% identity) | M.EcoBL08ORF15090P | |
| 15100 | crossover junction endodeoxyribonuclease rusA | |||
| 19430 | phosphohydrolase | |||
| 19440 | M | M.EcosEC5DcmP (100% identity) | CCWGG | M.EcoBL08DcmP |
| 19450 | V | V.EcosEC7DcmP (100% identity) | V.EcoBL08DcmP | |
| 19460 | multidrug transporter | |||
| 30880 | replication endonuclease from | |||
| 30890 | M | M.SspS13ORF8710P (100% identity) | GATC | M.EcoBL08ORF30890P |
| 30900 | 75 aa hypothetical protein | |||
| 36660 | phage holin, lambda family protein | |||
| 36670 | M | M.SflSTLE1ORF5465P (100% identity) | M.EcoBL08ORF36670P | |
| 36680 | 67 aa hypothetical protein | |||
| 39950 | Lysis protein S homolog from lambdoid prophage | |||
| 39960 | M | M.Sso63633ORF22290P (100% identity) | M.EcoBL08ORF39960P | |
| 39970 | 67 aa hypothetical protein | |||
| plasmid pWP2-S18-ESBL-08_2 | ||||
| 20730 | 208 aa hypothetical protein | |||
| 20740 | M | M.SenBR027ORFEP (100% identity) | SAY | M.EcoBL08ORF20740P |
| 20750 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 36360 | ATPase AAA | |||
| 36370 | R | Ecop10BGmrSDP (100% identity) | EcoBL08GmrSDP | |
| 36380 | 343 aa hypothetical protein | |||
| 40500 | GTPase | |||
| 40510 | R | Ssp28760MrrP (100% identity) | EcoBL08MrrP | |
| 40520 | type I restriction-modification system | |||
| 40550 | endoribonuclease SymE | |||
| ??? | R | SenHNK130McrBP (100% identity) | EcoBL08McrBP | |
| 40570 | R | SenHNK130McrCP (87% identity) | EcoBL08McrCP | |
| 40580 | repressor TnpA | |||