Escherichia coli WP2-S18-ESBL-07 |
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Putative Escherichia coli WP2-S18-ESBL-07 RM systems
Ref: Sekizuka,T. et al. unpublished
REBASE ref # 30911
| Sequence length: | GenBank #: | |
| Chromosome: | 4,771,018 bp | AP021944 |
| plasmid pWP2-S18-ESBL-07_1: | 103,781 bp | AP021945 |
REBASE acronym: EcoWP2
Org_num: 41985
All begin WP2S18E07_, WP2S18E07_P
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6660 | IS5 family transposase | |||
| 6670 | R | Sfl877IIP (20% identity) | EcoWP2ORF6710BP | |
| 6680 | IS5 family transposase | |||
| 6690 | R | EcoDX6ORF3345AP (99% identity) | EcoWP2ORF6710AP | |
| 6700 | S | S.EcoDX6ORF3345P (100% identity) | S.EcoWP2ORF6710P | |
| 6710 | M | M.EcoDX6ORF3345P (100% identity) | M.EcoWP2ORF6710P | |
| 6720 | 290 aa hypothetical protein | |||
| 37890 | restriction endonuclease | |||
| 37900 | R | SflFF24ORF19705P (100% identity) | EcoWP2ORF37910P | |
| 37910 | M | M.SflFF24ORF19705P (100% identity) | M.EcoWP2ORF37910P | |
| 37920 | S | S.SflFF24ORF19705P (100% identity) | S.EcoWP2ORF37910P | |
| 37930 | endoribonuclease SymE | |||
| 38370 | restriction methylase | |||
| 38380 | M | M.SsoSE61ORF6540P (100% identity) | GACNNNNNNRTAAY | M.EcoWP2ORF38380P |
| 38390 | S | S.EcoC309ORF20945P (99% identity) | GACNNNNNNRTAAY | S.EcoWP2ORF38380P |
| 38400 | R | SflFF22ORF2075P (100% identity) | GACNNNNNNRTAAY | EcoWP2ORF38380P |
| 38410 | oxidoreductase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3600 | cell division protein DamX | |||
| 3610 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoWP2DamP |
| 3620 | ribulose-phosphate 3-epimerase | |||
| 4600 | 59 aa hypothetical protein | |||
| 4610 | M | M.SflWW1ORF2205P (100% identity) | ATGCAT | M.EcoWP2ORF4610P |
| 4620 | DNA-binding protein Fis | |||
| 11500 | 164 aa hypothetical protein | |||
| 11510 | M | M.Sso7924ORF2966P (100% identity) | GATC | M.EcoWP2ORF11510P |
| 11520 | LexA family transcriptional regulator | |||
| 18920 | 231 aa hypothetical protein | |||
| 18930 | M | M.SflLIN6DcmP (99% identity) | CCWGG | M.EcoWP2DcmP |
| 18940 | V | V.SflFF64DcmP (100% identity) | V.EcoWP2DcmP | |
| 18950 | inner membrane transporter YedA | |||
| plasmid pWP2-S18-ESBL-07_1 | ||||
| 10380 | 308 aa hypothetical protein | |||
| 10390 | M | M.SflFF3ORF25360P (100% identity) | M.EcoWP2ORF10390P | |
| 10400 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11920 | 42 aa hypothetical protein | |||
| 11930 | R | Eco3741GmrSDP (100% identity) | EcoWP2GmrSDP | |
| 11940 | 306 aa hypothetical protein | |||
| 37880 | GTPase | |||
| 37890 | R | Ssp28760MrrP (100% identity) | EcoWP2MrrP | |
| 37900 | type I restriction-modification system | |||
| 37930 | endoribonuclease SymE | |||
| ??? | R | SflFF24McrBP (100% identity) | EcoWP2McrBP | |
| 37950 | R | SflFF24McrCP (100% identity) | EcoWP2McrCP | |