Escherichia coli SY3626C1 |
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Putative Escherichia coli SY3626C1 RM systems
Ref: Sun,H. unpublished
REBASE ref # 30927
| Sequence length: | GenBank #: | |
| Chromosome: | 4,682,503 bp | CP059043 |
| plasmid pSY3626C1_315k: | 315,984 bp | CP059044 |
REBASE acronym: Eco626C1
Org_num: 41981
All begin HZ987_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1535 | endoribonuclease SymE | |||
| 1540 | S | S.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | S.Eco626C1ORF1545P |
| 1545 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.Eco626C1ORF1545P |
| 1550 | R | Msa17ORFC2P (98% identity) | AACNNNNNNGTGC | Eco626C1ORF1545P |
| 1555 | adenine/cytosine-specific restriction | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12110 | drug/metabolite exporter YedA | |||
| 12115 | V | V.SflFF64DcmP (100% identity) | V.Eco626C1DcmP | |
| 12120 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco626C1DcmP |
| 12125 | phosphohydrolase | |||
| 18625 | DNA-binding transcriptional regulator Fis | |||
| 18630 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.Eco626C1ORF18630P |
| 18635 | DUF2556 family protein | |||
| 19250 | ribulose-phosphate 3-epimerase | |||
| 19255 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco626C1DamP |
| 19260 | cell division protein DamX | |||
| plasmid pSY3626C1_315k | ||||
| 23040 | 56 aa hypothetical protein | |||
| 23045 | M | M.Sens770ORF21675P (100% identity) | M.Eco626C1ORF23045P | |
| 23050 | thermonuclease family protein | |||
| 23720 | 73 aa hypothetical protein | |||
| 23725 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.Eco626C1ORF23725P |
| 23730 | 102 aa hypothetical protein | |||
| 24190 | DNA-binding protein | |||
| 24195 | M | M.Ype21801ORF197P (100% identity) | M.Eco626C1ORF24195P | |
| 24200 | 273 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1520 | 906 aa hypothetical protein | |||
| 1525 | R | SenHNK130McrCP (100% identity) | Eco626C1McrCP | |
| 1530 | R | SenHNK130McrBP (100% identity) | Eco626C1McrBP | |
| 1535 | endoribonuclease SymE | |||
| 1550 | type I restriction-modification system | |||
| 1555 | R | SenHNK130MrrP (100% identity) | Eco626C1MrrP | |
| 1560 | GTPase | |||
| 7940 | site-specific DNA recombinase | |||
| 7945 | R | SsoSE61ORF22640P (100% identity) | YCGR | Eco626C1ORF7945P |
| 7950 | isocitrate dehydrogenase | |||