Escherichia coli SY3626C5 |
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Putative Escherichia coli SY3626C5 RM systems
Ref: Sun,H. unpublished
REBASE ref # 30927
| Sequence length: | GenBank #: | |
| Chromosome: | 4,682,503 bp | CP058948 |
| plasmid pSY3626C1_124k: | 124,445 bp | CP058950 |
| plasmid pSY3626C1_229k: | 229,493 bp | CP058949 |
REBASE acronym: Eco626C5
Org_num: 41982
All begin HZ988_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1540 | endoribonuclease SymE | |||
| 1545 | S | S.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | S.Eco626C5ORF1550P |
| 1550 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.Eco626C5ORF1550P |
| 1555 | R | Msa17ORFC2P (98% identity) | AACNNNNNNGTGC | Eco626C5ORF1550P |
| 1560 | adenine/cytosine-specific restriction | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12115 | drug/metabolite exporter YedA | |||
| 12120 | V | V.SflFF64DcmP (100% identity) | V.Eco626C5DcmP | |
| 12125 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco626C5DcmP |
| 12130 | phosphohydrolase | |||
| 18630 | DNA-binding transcriptional regulator Fis | |||
| 18635 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.Eco626C5ORF18635P |
| 18640 | DUF2556 family protein | |||
| 19255 | ribulose-phosphate 3-epimerase | |||
| 19260 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco626C5DamP |
| 19265 | cell division protein DamX | |||
| plasmid pSY3626C1_124k | ||||
| 24405 | 73 aa hypothetical protein | |||
| 24410 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.Eco626C5ORF24410P |
| 24415 | 102 aa hypothetical protein | |||
| plasmid pSY3626C1_229k | ||||
| 23330 | 56 aa hypothetical protein | |||
| 23335 | M | M.Sens770ORF21675P (100% identity) | M.Eco626C5ORF23335P | |
| 23340 | thermonuclease family protein | |||
| 23775 | DNA-binding protein | |||
| 23780 | M | M.Ype21801ORF197P (100% identity) | M.Eco626C5ORF23780P | |
| 23785 | 273 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1525 | 906 aa hypothetical protein | |||
| 1530 | R | SenHNK130McrCP (100% identity) | Eco626C5McrCP | |
| 1535 | R | SenHNK130McrBP (100% identity) | Eco626C5McrBP | |
| 1540 | endoribonuclease SymE | |||
| 1555 | type I restriction-modification system | |||
| 1560 | R | SenHNK130MrrP (100% identity) | Eco626C5MrrP | |
| 1565 | GTPase | |||
| 7940 | site-specific DNA recombinase | |||
| 7945 | R | SsoSE61ORF22640P (100% identity) | YCGR | Eco626C5ORF7945P |
| 7950 | isocitrate dehydrogenase | |||