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Putative Agrobacterium vitis VAR03-1 RM systems
Ref: Kawaguchi,A. et al. J. Gen. Plant Pathol. 73, 133-138 (2007)
REBASE ref # 30810
Sequence length: | GenBank #: | |
chromosome 1: | 3,604,775 bp | AP023268 |
chromosome 2: | 1,156,266 bp | AP023269 |
REBASE acronym: Avi31
Org_num: 41651
All begin RvVAR031_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
chromosome 1 | ||||
8160 | 320 aa hypothetical protein | |||
8170 | M | M.Avi630ORF34300P (95% identity) | M.Avi31ORF8170P | |
8180 | S | S.Bca510ORF3820P (42% identity) | S.Avi31ORF8170P | |
8190 | 132 aa hypothetical protein | |||
8200 | 237 aa hypothetical protein | |||
8210 | 159 aa hypothetical protein | |||
8220 | R | Avi630ORF34300P (93% identity) | Avi31ORF8170P | |
8230 | 337 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
chromosome 1 | ||||
26480 | aspartate aminotransferase family protein | |||
26490 | RM | Avi78ORF10740P (90% identity) | Avi31ORF26490P | |
26500 | branched chain amino acid ABC transporter | |||
chromosome 2 | ||||
36130 | 85 aa hypothetical protein | |||
36140 | M | M.Rsp34AORF3615P (69% identity) | M.Avi31ORF36140P | |
36150 | 43 aa hypothetical protein | |||
Orphan M | ||||
ORF | Gene | Most similar | Specificity | Name |
chromosome 1 | ||||
11480 | (2Fe-2S) ferredoxin | |||
??? | M | M.Avi412ORF2710P (94% identity) | M.Avi31ORF11490P | |
11500 | 618 aa hypothetical protein |