Avibacterium paragallinarum AVPG2015 |
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Putative Avibacterium paragallinarum AVPG2015 RM systems
Ref: Cobos-Justo,M.E. et al. unpublished
REBASE ref # 30813
Complete sequence: 2,532,404 bp
GenBank #: CP058307
REBASE acronym: Apa2015
Org_num: 41654
All begin VY92_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 11095 | MFS transporter | |||
| 11100 | S | S1.ApaESV135ORF11005P (100% identity) | S1.Apa2015ORF11110P | |
| 11105 | S | S2.ApaAP17ORF9105P (100% identity) | S2.Apa2015ORF11110P | |
| 11110 | M | M.ApaESV135ORF11005P (100% identity) | M.Apa2015ORF11110P | |
| 11115 | S | S1.ApaAP17ORF9105P (100% identity) | S3.Apa2015ORF11110P | |
| 11120 | site-specific integrase | |||
| 11530 | DUF927 domain-containing protein | |||
| 11535 | R | ApaAP17ORF10770P (100% identity) | Apa2015ORF11555P | |
| 11540 | MFS transporter | |||
| 11545 | 308 aa hypothetical protein | |||
| 11550 | S | S.ApaESV135ORF11455P (100% identity) | S.Apa2015ORF11555P | |
| 11555 | M | M.ApaAP10ORF10785P (97% identity) | M.Apa2015ORF11555P | |
| 11560 | 197 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1120 | nucleoside triphosphate pyrophosphohydrolase | |||
| 1125 | M | M.Apap4ORF8230P (100% identity) | M.Apa2015ORF1125P | |
| 1130 | replication endonuclease | |||
| 2095 | 287 aa hypothetical protein | |||
| ??? | M | M.ApaAP01ORF7020P (100% identity) | M.Apa2015ORF2100P | |
| 2110 | class I SAM-dependent methyltransferase | |||
| 2240 | ATP-binding protein | |||
| 2245 | M | M.ApaESV135ORF2155P (100% identity) | M.Apa2015ORF2245P | |
| 2250 | DUF1367 family protein | |||
| 2585 | 159 aa hypothetical protein | |||
| ??? | M | M.ApaESV135ORF2500P (100% identity) | M.Apa2015ORF2590P | |
| 2595 | R | ApaESV135ORF2500P (100% identity) | Apa2015ORF2590P | |
| 2600 | valine--tRNA ligase | |||
| 5175 | ArsC family reductase | |||
| 5180 | M | M2.ApaESV135ORF3980P (100% identity) | M1.Apa2015ORF5180P | |
| 5185 | R | ApasMORFGP (100% identity) | Apa2015ORF5180P | |
| 5190 | M | M1.ApaESV135ORF3980P (100% identity) | M2.Apa2015ORF5180P | |
| 5195 | threonine synthase | |||
| 8595 | endolytic transglycosylase MltG | |||
| 8600 | RM | ApaAP17ORF540P (99% identity) | Apa2015ORF8600P | |
| 8605 | phosphoglycerate dehydrogenase | |||
| 11745 | helix-turn-helix transcriptional regulator | |||
| 11750 | M | M1.ApaESV135ORF11650P (100% identity) | M1.Apa2015ORF11750P | |
| 11755 | M | M2.ApaESV135ORF11650P (100% identity) | M2.Apa2015ORF11750P | |
| 11760 | RM | ApaESV135ORF11650P (100% identity) | Apa2015ORF11750P | |
| 11765 | 30S ribosomal protein S12 methylthiotransferase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5330 | IS3 family transposase | |||
| 5335 | R | ApaESV135ORF3825P (100% identity) | Apa2015ORF5340P | |
| ??? | M | M.ApaAP16ORF4320P (100% identity) | M.Apa2015ORF5340P | |
| 5350 | LysR family transcriptional regulator | |||
| 11150 | 50 aa hypothetical protein | |||
| 11155 | M | M.ApaESV135ORF11050P (100% identity) | M.Apa2015ORF11155P | |
| 11160 | R | ApaESV135ORF11050P (100% identity) | Apa2015ORF11155P | |
| 11165 | aminoacyl-histidine dipeptidase | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7455 | DUF721 domain-containing protein | |||
| ??? | M | M.ApaESV135ORF7360P (100% identity) | M.Apa2015ORF7460P | |
| 7465 | 3-dehydroquinate synthase | |||