Salmonella enterica subsp. enterica serovar Infantis VNSEC002 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Infantis VNSEC002 RM systems
Ref: Hoffmann,M. et al. unpublished
REBASE ref # 30862
| Sequence length: | GenBank #: | |
| Chromosome: | 4,727,131 bp | CP039443 |
| plasmid pCFSAN086834: | 321,889 bp | CP039444 |
REBASE acronym: SenC002
Org_num: 41775
All begin E8N15_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1805 | cell division protein DamX | |||
| 1810 | M | M.StyTDamP (100% identity) | GATC | M.SenC002DamP |
| 1815 | ribulose-phosphate 3-epimerase | |||
| 2290 | DUF2556 domain-containing protein | |||
| 2295 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenC002ORF2295P |
| 2300 | DNA-binding transcriptional regulator Fis | |||
| 9140 | ParA family protein | |||
| 9145 | M | M.SenSPE55ORF9095P (100% identity) | M.SenC002ORF9145P | |
| 9150 | DNA-binding protein | |||
| 9235 | phosphohydrolase | |||
| 9240 | M | M.SenTR01mDcmP (100% identity) | CCWGG | M.SenC002DcmP |
| 9245 | V | V.StyUK1DcmP (100% identity) | V.SenC002DcmP | |
| 9250 | drug/metabolite exporter YedA | |||
| 19800 | IS3 family transposase | |||
| 19805 | M | M.SinI (99% identity) | GGWCC | M.SenC002ORF19805P |
| 19810 | R | SinI (100% identity) | GGWCC | SenC002ORF19805P |
| 19815 | DUF4102 domain-containing protein | |||
| plasmid pCFSAN086834 | ||||
| 24905 | 73 aa hypothetical protein | |||
| 24910 | M | M.Sso866ORF27155P (100% identity) | M.SenC002ORF24910P | |
| 24915 | 101 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17445 | 33 aa hypothetical protein | |||
| 17450 | R | SensSZL31ORF18150P (100% identity) | CAGAG | SenC002ORF17455P |
| 17455 | M | M.SensSZL31ORF18150P (100% identity) | CAGAG | M.SenC002ORF17455P |
| 17460 | MFS transporter | |||