Salmonella enterica subsp. enterica serovar Kentucky VNSEC013 |
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Putative Salmonella enterica subsp. enterica serovar Kentucky VNSEC013 RM systems
Ref: Hoffmann,M. et al. unpublished
REBASE ref # 30862
| Sequence length: | GenBank #: | |
| Chromosome: | 4,831,443 bp | CP039439 |
| plasmid pCFSAN086836: | 276,733 bp | CP039440 |
REBASE acronym: SenC013
Org_num: 41777
All begin E8N23_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19955 | 322 aa hypothetical protein | |||
| 19960 | R | SspA292ORF20040P (100% identity) | GAYANNNNNNNNGTGG | SenC013ORF19965P |
| 19965 | M | M.SspA292ORF20040P (100% identity) | GAYANNNNNNNNGTGG | M.SenC013ORF19965P |
| 19970 | S | S.SspA292ORF20040P (100% identity) | GAYANNNNNNNNGTGG | S.SenC013ORF19965P |
| 19975 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1795 | cell division protein DamX | |||
| 1800 | M | M.StyTDamP (100% identity) | GATC | M.SenC013DamP |
| 1805 | ribulose-phosphate 3-epimerase | |||
| 2280 | DUF2556 domain-containing protein | |||
| 2285 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenC013ORF2285P |
| 2290 | DUF4102 domain-containing protein | |||
| 3290 | DUF2732 family protein | |||
| 3295 | M | M.SenUA39ORF1528P (100% identity) | M.SenC013ORF3295P | |
| 3300 | replication endonuclease | |||
| 7255 | NinE family protein | |||
| 7260 | M | M.SspA292ORF7010P (99% identity) | M.SenC013ORF7260P | |
| 7265 | protein ninF | |||
| 9590 | phosphohydrolase | |||
| 9595 | M | M.SspZ54DcmP (100% identity) | CCWGG | M.SenC013DcmP |
| 9600 | V | V.StyUK1DcmP (100% identity) | V.SenC013DcmP | |
| 9605 | drug/metabolite exporter YedA | |||
| 20095 | YebC/PmpR family DNA-binding transcriptional | |||
| ??? | R | SenTY27ORF20805P (100% identity) | SenC013ORF20100P | |
| 20105 | malate transporter | |||
| 20135 | BREX system P-loop protein BrxC | |||
| 20140 | RM | SspA292ORF20215P (100% identity) | GAANCAG | SenC013ORF20140P |
| 20145 | ABC transporter ATP-binding protein | |||
| plasmid pCFSAN086836 | ||||
| 24155 | 108 aa hypothetical protein | |||
| 24160 | M | M.YpsF1ORFBP (100% identity) | M.SenC013ORF24160P | |
| 24165 | 202 aa hypothetical protein | |||
| 24315 | DNA-binding protein | |||
| 24320 | M | M.YpsF1ORFDP (100% identity) | M.SenC013ORF24320P | |
| 24325 | 284 aa hypothetical protein | |||
| 25110 | DUF1173 domain-containing protein | |||
| 25115 | M | M.YpsF1ORFCP (100% identity) | M.SenC013ORF25115P | |
| 25120 | thermonuclease family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17550 | 33 aa hypothetical protein | |||
| 17555 | R | SspA292ORF17210P (100% identity) | CAGAG | SenC013ORF17560P |
| 17560 | M | M.SspA292ORF17210P (100% identity) | CAGAG | M.SenC013ORF17560P |
| 17565 | MFS transporter | |||