Ralstonia solanacearum FJAT91-F1 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Ralstonia solanacearum FJAT91-F1 RM systems
Ref: Zheng,X. unpublished
REBASE ref # 29240
| Sequence length: | GenBank #: | |
| Chromosome: | 3,873,221 bp | CP056083 |
| plasmid plas1: | 2,000,885 bp | CP056084 |
REBASE acronym: RsoF1
Org_num: 41637
All begin HWE45_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 280 | Rrf2 family transcriptional regulator | |||
| 285 | M | M.RsoYQORF285P (100% identity) | M.RsoF1ORF285P | |
| 290 | 284 aa hypothetical protein | |||
| 295 | R | RsoYQORF285P (100% identity) | RsoF1ORF285P | |
| 300 | sensor histidine kinase N-terminal | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1090 | ATP-binding protein | |||
| 1095 | R | Rso91ORFMP (100% identity) | RsoF1ORF1100P | |
| 1100 | M | M.Rso91ORFMP (100% identity) | M.RsoF1ORF1100P | |
| 1105 | V | V.Rso91F8ORF1100P (100% identity) | V.RsoF1ORF1100P | |
| 1110 | site-specific integrase | |||
| 1255 | HNH endonuclease | |||
| 1260 | M | M1.RsoYQORF1165P (100% identity) | M1.RsoF1ORF1260P | |
| 1265 | M | M2.RsoYQORF1165P (100% identity) | M2.RsoF1ORF1260P | |
| 1270 | 121 aa hypothetical protein | |||
| 1370 | type III secretion system YopJ family effector | |||
| 1375 | M | M.RsoYQORF1280P (100% identity) | M.RsoF1ORF1375P | |
| 1380 | phage tail tape measure protein | |||
| 2145 | Com family DNA-binding transcriptional | |||
| 2150 | M | M.RsoYQORF2055P (100% identity) | M.RsoF1ORF2150P | |
| 2160 | helix-turn-helix transcriptional regulator | |||
| 7610 | tryptophan synthase subunit beta | |||
| 7615 | M | M.Rsp647ORF10140P (100% identity) | GTWWAC | M.RsoF1ORF7615P |
| 7620 | tryptophan synthase subunit alpha | |||
| 12910 | type II toxin-antitoxin system VapC family | |||
| 12915 | M | M.RsoYQORF13165P (100% identity) | M.RsoF1ORF12915P | |
| 12920 | 97 aa hypothetical protein | |||
| 13270 | 408 aa hypothetical protein | |||
| 13275 | M | M.Rsp650ORF13560P (100% identity) | M.RsoF1ORF13275P | |
| 13280 | H-NS histone family protein | |||
| 13395 | DUF86 domain-containing protein | |||
| 13400 | M | M2.Rsp647ORF4655P (100% identity) | M1.RsoF1ORF13400P | |
| 13405 | M | M2.Rsp650ORF13700P (100% identity) | M2.RsoF1ORF13400P | |
| 13410 | 135 aa hypothetical protein | |||
| plasmid plas1 | ||||
| 20540 | mannose-binding lectin protein | |||
| 20545 | M | M.RsoYQORF24925P (100% identity) | M.RsoF1ORF20545P | |
| 20550 | type III secretion system effector protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 175 | bifunctional (p)ppGpp | |||
| 180 | R | RsoYQMrrP (100% identity) | RsoF1Mrr2P | |
| 185 | O-acetylhomoserine | |||