Planktothrix rubescens NIVA-CYA 18 |
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Putative Planktothrix rubescens NIVA-CYA 18 RM systems
Ref: William,W. unpublished
REBASE ref # 11641
| Sequence length: | GenBank #: | |
| chromosome I: | 5,464,396 bp | LR882958 |
| plasmid p1: | 78,572 bp | LR882959 |
| plasmid p2: | 93,983 bp | LR882960 |
| plasmid p3: | 48,498 bp | LR882961 |
REBASE acronym: Pru7821
Org_num: 60226
All begin PCC7821_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 2815 | Ferredoxin-dependent glutamate synthase 2 | |||
| 2816 | M | M.Pru82ORF2754P (83% identity) | M.Pru7821ORF2816P | |
| 2817 | Glycolate oxidase subunit GlcD | |||
| 3424 | 490 aa hypothetical protein | |||
| 3425 | M | M.Pru82ORF3352P (99% identity) | M.Pru7821ORF3425P | |
| 3426 | 78 aa hypothetical protein | |||
| 3427 | YcfA family protein | |||
| 3428 | Antitoxin | |||
| 3429 | protein MJ0435 | |||
| 3430 | UPF0331 protein | |||
| 3431 | 73 aa hypothetical protein | |||
| 3432 | 136 aa hypothetical protein | |||
| 3433 | 66 aa hypothetical protein | |||
| 3434 | S | S.Pag365ORF734P (66% identity) | S.Pru7821ORF3425P | |
| 3435 | Helix-turn-helix domain protein | |||
| 3436 | 85 aa hypothetical protein | |||
| 3437 | 137 aa hypothetical protein | |||
| 3438 | R | PagC7805ORF333P (97% identity) | Pru7821ORF3425P | |
| 3439 | 204 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 192 | 72 aa hypothetical protein | |||
| 193 | M | M.Pru82ORF142P (99% identity) | M.Pru7821ORF193P | |
| 194 | Adenosylhomocysteinase | |||
| 203 | Na(+)/H(+) antiporter NhaS2 | |||
| 204 | RM | Pru108ORF3039P (98% identity) | Pru7821ORF204P | |
| 205 | MEKHLA domain protein | |||
| 371 | 205 aa hypothetical protein | |||
| 372 | M | M.Pag758ORF872P (100% identity) | M.Pru7821ORF372P | |
| 373 | Modification methylase HincII | |||
| 372 | Modification methylase RsrI | |||
| 373 | M | M.Pag758ORF873P (100% identity) | M.Pru7821ORF373P | |
| 374 | Cold shock-like protein CspC | |||
| 407 | 122 aa hypothetical protein | |||
| 408 | M | M.Pru108ORF2835P (100% identity) | M.Pru7821ORF408P | |
| 409 | transposase in snaA-snaB intergenic | |||
| 488 | PIN domain protein like protein | |||
| 489 | RM | Pru82ORF444P (94% identity) | Pru7821ORF489P | |
| 490 | 80 aa hypothetical protein | |||
| 927 | 812 aa hypothetical protein | |||
| 928 | R | Pru82ORF878P (100% identity) | Pru7821ORF929P | |
| 929 | M | M.Pru82ORF878P (100% identity) | M.Pru7821ORF929P | |
| 930 | 55 aa hypothetical protein | |||
| 952 | Anthranilate phosphoribosyltransferase | |||
| 953 | RM | Pru82ORF901P (99% identity) | Pru7821ORF953P | |
| 954 | 84 aa hypothetical protein | |||
| 1049 | 220 aa hypothetical protein | |||
| 1050 | M | M.Pru108ORF2192P (98% identity) | M.Pru7821ORF1050P | |
| 1051 | 206 aa hypothetical protein | |||
| 1147 | Cysteine desulfurase IscS | |||
| 1148 | M | M.Pag2AORF2805P (99% identity) | M.Pru7821ORF1148P | |
| 1149 | 184 aa hypothetical protein | |||
| 1148 | Modification methylase MjaII | |||
| 1149 | R | Pru82ORF1097P (99% identity) | Pru7821ORF1149P | |
| 1150 | adenylate kinase 5, chloroplastic | |||
| 1243 | 743 aa hypothetical protein | |||
| 1244 | RM | Pru82ORF1195P (85% identity) | Pru7821ORF1244P | |
| 1245 | 29 aa hypothetical protein | |||
| 1357 | Inorganic triphosphatase | |||
| 1358 | RM | Pag1268ORF1447P (98% identity) | Pru7821ORF1358P | |
| 1359 | CO2 hydration protein | |||
| 1436 | 241 aa hypothetical protein | |||
| 1437 | M | M.Pru82ORF1381P (100% identity) | M.Pru7821ORF1437P | |
| 1439 | protein aq_1220 | |||
| 1498 | Dihydroorotase | |||
| 1499 | M | M.Pru108ORF1759P (99% identity) | M.Pru7821ORF1499P | |
| 1500 | R | Pru82ORF1446P (100% identity) | Pru7821ORF1499P | |
| 1501 | Deoxyribose-phosphate aldolase | |||
| 1551 | 76 aa hypothetical protein | |||
| 1552 | RM | Pag1268ORF221P (82% identity) | Pru7821ORF1552P | |
| 1553 | Adenylate cyclase 1 | |||
| 1768 | Peptidase C14, caspase catalytic subunit p20 | |||
| 1769 | M | M.Pag976ORF166P (100% identity) | M.Pru7821ORF1769P | |
| 1770 | 290 aa hypothetical protein | |||
| 1771 | Type III restriction protein res subunit | |||
| 1772 | M | M.Pag7811ORF1364P (99% identity) | M.Pru7821ORF1772P | |
| 1773 | 170 aa hypothetical protein | |||
| 1941 | Ribosomal protein S12 methylthiotransferase | |||
| 1942 | M | M.Pru82ORF1893P (99% identity) | M.Pru7821ORF1942P | |
| 1943 | 200 aa hypothetical protein | |||
| 1999 | 409 aa hypothetical protein | |||
| 2000 | M | M.PagC7805ORF1879P (94% identity) | M.Pru7821ORF2000P | |
| 2001 | 46 aa hypothetical protein | |||
| 2064 | Restriction endonuclease R,XbaI | |||
| 2065 | M | M.Pru82ORF2026P (100% identity) | M.Pru7821ORF2065P | |
| 2066 | 302 aa hypothetical protein | |||
| 2108 | protein Rv2102 | |||
| 2109 | R | Pru82ORF2078BP (100% identity) | Pru7821ORF2115BP | |
| 2110 | Transposase for transposon Tn1546 | |||
| 2111 | 87 aa hypothetical protein | |||
| 2112 | 160 aa hypothetical protein | |||
| 2113 | Tyrosine recombinase XerC | |||
| 2114 | R | Pru82ORF2078AP (100% identity) | Pru7821ORF2115AP | |
| 2115 | M | M.Pru82ORF2078P (100% identity) | M.Pru7821ORF2115P | |
| 2116 | Photosystem II CP43 reaction center protein | |||
| 2120 | 3-oxoacyl-[acyl-carrier-protein] synthase 2 | |||
| 2121 | M | M.Pru82ORF2085P (99% identity) | M.Pru7821ORF2121P | |
| 2122 | 155 aa hypothetical protein | |||
| 2190 | 189 aa hypothetical protein | |||
| 2191 | M | M.Pru82ORF2145P (81% identity) | M.Pru7821ORF2191P | |
| 2192 | 114 aa hypothetical protein | |||
| 2358 | Polyphosphate:ADP phosphotransferase | |||
| 2359 | RM | Pru82ORF2321P (98% identity) | Pru7821ORF2359P | |
| 2360 | 66 aa hypothetical protein | |||
| 2524 | 105 aa hypothetical protein | |||
| 2525 | RM | Pru82ORF2479P (99% identity) | Pru7821ORF2525P | |
| 2526 | adenine-specific methylase MJECS02 | |||
| 2525 | Type IIS restriction enzyme Eco57I | |||
| 2526 | RM | Pru82ORF2480P (98% identity) | Pru7821ORF2526P | |
| 2527 | 122 aa hypothetical protein | |||
| 2862 | Similar to tr/P73393/P73393 | |||
| 2863 | M | M.Pru82ORF2798P (98% identity) | M.Pru7821ORF2863P | |
| 2864 | protein SYNPCC7002_A0175 | |||
| 2888 | 55 aa hypothetical protein | |||
| 2889 | M | M.Pru108ORF369P (100% identity) | M.Pru7821ORF2889P | |
| 2890 | 74 aa hypothetical protein | |||
| 2923 | protein HI_1419 | |||
| 2924 | M | M.Pru108ORF333P (99% identity) | M.Pru7821ORF2924P | |
| 2925 | Dipeptide transport system permease protein | |||
| 3106 | 76 aa hypothetical protein | |||
| 3107 | RM | Pru82ORF3031P (99% identity) | Pru7821ORF3107P | |
| 3108 | 395 aa hypothetical protein | |||
| 3119 | 162 aa hypothetical protein | |||
| 3120 | R | Pru82ORF3047P (99% identity) | Pru7821ORF3121P | |
| 3121 | M | M.Pru108ORF147P (100% identity) | ATGCAT | M.Pru7821ORF3121P |
| 3122 | Arsenite methyltransferase | |||
| 3177 | transposase for insertion sequence | |||
| 3178 | M | M.Pru82ORF3106P (100% identity) | M.Pru7821ORF3178P | |
| 3179 | zinc protease SCO5738 | |||
| 3523 | Phosphoribosylamine--glycine ligase | |||
| 3524 | M | M.Pru108ORF4611P (99% identity) | M.Pru7821ORF3524P | |
| 3525 | 123 aa hypothetical protein | |||
| 3589 | 293 aa hypothetical protein | |||
| 3590 | M | M.Pru82ORF3513P (100% identity) | M.Pru7821ORF3590P | |
| 3591 | ABC transporter ATP-binding protein | |||
| 3632 | 159 aa hypothetical protein | |||
| 3633 | R | Pru82ORF3555P (100% identity) | Pru7821ORF3634P | |
| ??? | M | M.Pru108ORF4503P (100% identity) | M.Pru7821ORF3634P | |
| 3636 | reverse transcriptase | |||
| 4136 | 206 aa hypothetical protein | |||
| ??? | M | M.Pru82ORF4055P (98% identity) | M.Pru7821ORF4137P | |
| 4138 | DNA polymerase III subunit alpha | |||
| 4201 | 562 aa hypothetical protein | |||
| 4202 | RM | Pag7811ORF33P (97% identity) | Pru7821ORF4202P | |
| 4203 | Phycobiliprotein ApcE | |||
| 4217 | Ribosome-binding ATPase YchF | |||
| 4218 | M | M.Pru82ORF4129P (15% identity) | M.Pru7821ORF4218AP | |
| 4219 | transposase for insertion sequence | |||
| 4220 | M | M.Pru108ORF3924P (84% identity) | M.Pru7821ORF4218BP | |
| 4221 | Energy-coupling factor transporter ATP-binding | |||
| 4239 | 125 aa hypothetical protein | |||
| 4240 | RM | Pag758ORF4657P (97% identity) | Pru7821ORF4240P | |
| 4241 | Type I restriction enzyme R protein N terminal | |||
| 4426 | Sensor histidine kinase WalK | |||
| 4427 | M | M.Pag66ORF3778P (100% identity) | M.Pru7821ORF4427P | |
| 4428 | R | Pag66ORF3778P (100% identity) | Pru7821ORF4427P | |
| 4429 | Photosystem I P700 chlorophyll a apoprotein A2 | |||
| 4747 | 519 aa hypothetical protein | |||
| 4748 | R | Pru82ORF4655P (100% identity) | Pru7821ORF4748P | |
| 4749 | 525 aa hypothetical protein | |||
| 4748 | HNH endonuclease | |||
| 4749 | M | M.Pru82DndCP (100% identity) | M.Pru7821DndCP | |
| 4750 | 661 aa hypothetical protein | |||
| 4749 | 525 aa hypothetical protein | |||
| 4750 | M | M.Pag1268DndDP (97% identity) | M.Pru7821DndDP | |
| 4751 | DNA sulfur modification protein DndE | |||
| 4750 | 661 aa hypothetical protein | |||
| 4751 | M | M.Pag976DndEP (100% identity) | M.Pru7821DndEP | |
| 4752 | 175 aa hypothetical protein | |||
| plasmid p1 | ||||
| 4980 | transposase YncI | |||
| 4981 | RM | Afl14aORF8955P (63% identity) | Pru7821ORF4981P | |
| 4982 | HNH endonuclease | |||
| plasmid p2 | ||||
| 5005 | ATP-dependent helicase YqhH | |||
| 5006 | RM | PagC7805ORF4359P (91% identity) | Pru7821ORF5006P | |
| 5007 | 467 aa hypothetical protein | |||
| plasmid p3 | ||||
| 5111 | 79 aa hypothetical protein | |||
| 5112 | M | M.Pru82ORF5041P (78% identity) | M.Pru7821ORF5112P | |
| 5113 | 63 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 441 | Ycf54-like protein | |||
| 442 | M | M.Pru108ORF2799P (100% identity) | M.Pru7821ORF442P | |
| 443 | R | Pru108ORF2799P (98% identity) | Pru7821ORF442P | |
| 444 | 230 aa hypothetical protein | |||
| 2268 | Ferredoxin | |||
| 2269 | R | Pru82ORF2226P (100% identity) | Pru7821ORF2272P | |
| 2270 | 202 aa hypothetical protein | |||
| 2271 | 58 aa hypothetical protein | |||
| 2272 | M | M.Pru82ORF2226P (100% identity) | M.Pru7821ORF2272P | |
| 2274 | 121 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 31 | 306 aa hypothetical protein | |||
| 32 | R | Pag758MrrP (99% identity) | Pru7821MrrP | |
| 33 | SMC protein-like | |||
| 2746 | 154 aa hypothetical protein | |||
| 2747 | R | Pag758McrBP (92% identity) | Pru7821McrBP | |
| 2748 | 38 aa hypothetical protein | |||
| 2749 | R | Pag365McrCP (96% identity) | Pru7821McrCP | |
| 2750 | transcription regulator with HTH | |||
| 4481 | Genome sequencing data, contig C299 | |||
| 4482 | R | Pru82GmrSDP (100% identity) | Pru7821GmrSDP | |
| 4483 | Similarity | |||