Salmonella enterica subsp. enterica serovar Saintpaul CVM N16S133 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Saintpaul CVM N16S133 RM systems
Ref: Tyson,G.H. et al. Antimicrob. Agents Chemother. (2020) In press
REBASE ref # 30787
Complete sequence: 4,913,589 bp
GenBank #: CP049986
REBASE acronym: SenS133
Org_num: 41501
All begin CWX93_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19850 | restriction endonuclease | |||
| 19855 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | SenS133ORF19860P |
| 19860 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.SenS133ORF19860P |
| 19865 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenS133ORF19860P |
| 19870 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1785 | cell division protein DamX | |||
| 1790 | M | M.StyTDamP (100% identity) | GATC | M.SenS133DamP |
| 1795 | ribulose-phosphate 3-epimerase | |||
| 2275 | DUF2556 family protein | |||
| 2280 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenS133ORF2280P |
| 2285 | DNA-binding transcriptional regulator Fis | |||
| 3210 | DUF3850 domain-containing protein | |||
| 3215 | M | M.SenS1602ORF3445P (100% identity) | M.SenS133ORF3215P | |
| 3220 | replication endonuclease | |||
| 9120 | phosphohydrolase | |||
| 9125 | M | M.SenWDcmP (100% identity) | CCWGG | M.SenS133DcmP |
| 9130 | V | V.StyUK1DcmP (100% identity) | V.SenS133DcmP | |
| 9135 | drug/metabolite exporter YedA | |||
| 15475 | ead/Ea22-like family protein | |||
| 15480 | M | M.Ssp15303ORFAP (100% identity) | M.SenS133ORF15480P | |
| 15485 | Eaa protein | |||
| 19990 | YebC/PmpR family DNA-binding transcriptional | |||
| 19995 | R | SenS25ORF20520P (100% identity) | SenS133ORF19995P | |
| 20000 | malate transporter | |||
| 20000 | malate transporter | |||
| 20005 | M | M.SspZ69DndBP (100% identity) | M.SenS133DndBP | |
| 20010 | DNA phosphorothioation system sulfurtransferase | |||
| 20005 | DNA sulfur modification protein DndB | |||
| 20010 | M | M.SenS25DndCP (100% identity) | M.SenS133DndCP | |
| 20015 | DNA sulfur modification protein DndD | |||
| 20010 | DNA phosphorothioation system sulfurtransferase | |||
| 20015 | M | M.SenS25DndDP (100% identity) | M.SenS133DndDP | |
| 20020 | DNA sulfur modification protein DndE | |||
| 20015 | DNA sulfur modification protein DndD | |||
| 20020 | M | M.SspZ69DndEP (100% identity) | M.SenS133DndEP | |
| 20025 | DUF262 domain-containing protein | |||
| 20025 | DUF262 domain-containing protein | |||
| 20030 | R | SenS25DptHP (100% identity) | SenS133DptHP | |
| 20035 | DNA phosphorothioation-dependent restriction | |||
| 20030 | DNA phosphorothioation-dependent restriction | |||
| 20035 | R | SspZ69DptGP (100% identity) | SenS133DptGP | |
| 20040 | DNA phosphorothioation-dependent restriction | |||
| 20035 | DNA phosphorothioation-dependent restriction | |||
| 20040 | R | SspZ69DptFP (51% identity) | SenS133DptFBP | |
| 20045 | IS4-like element ISVsa5 family transposase | |||
| 20050 | R | Sen52030DptFP (49% identity) | SenS133DptFAP | |
| 20055 | integrase arm-type DNA-binding domain-containing | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17645 | 33 aa hypothetical protein | |||
| 17650 | R | SenS0870ORF17695P (100% identity) | CAGAG | SenS133ORF17655P |
| 17655 | M | M.StyUK1I (100% identity) | CAGAG | M.SenS133ORF17655P |
| 17660 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19845 | BrnT family toxin | |||
| 19850 | R | StyUK1MrrP (100% identity) | SenS133MrrP | |
| 19855 | type I restriction-modification system | |||