Salmonella enterica subsp. enterica serovar Saintpaul CVM N52030 |
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Putative Salmonella enterica subsp. enterica serovar Saintpaul CVM N52030 RM systems
Ref: Tyson,G.H. et al. Antimicrob. Agents Chemother. (2020) In press
REBASE ref # 30787
Complete sequence: 4,941,876 bp
GenBank #: CP049981
REBASE acronym: Sen52030
Org_num: 41503
All begin APM22_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 9800 | endoribonuclease SymE | |||
| 9805 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen52030ORF9810P |
| 9810 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen52030ORF9810P |
| 9815 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen52030ORF9810P |
| 9820 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3050 | DNA-binding transcriptional regulator Fis | |||
| 3055 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen52030ORF3055P |
| 3060 | DUF2556 family protein | |||
| 3540 | ribulose-phosphate 3-epimerase | |||
| 3545 | M | M.StyTDamP (100% identity) | GATC | M.Sen52030DamP |
| 3550 | cell division protein DamX | |||
| 9620 | integrase arm-type DNA-binding domain-containing | |||
| 9625 | R | SenS25DptFP (100% identity) | Sen52030DptFP | |
| 9630 | DNA phosphorothioation-dependent restriction | |||
| 9625 | DNA phosphorothioation-dependent restriction | |||
| 9630 | R | SspZ69DptGP (100% identity) | Sen52030DptGP | |
| 9635 | DNA phosphorothioation-dependent restriction | |||
| 9630 | DNA phosphorothioation-dependent restriction | |||
| 9635 | R | SenS25DptHP (100% identity) | Sen52030DptHP | |
| 9640 | DUF262 domain-containing protein | |||
| 9640 | DUF262 domain-containing protein | |||
| 9645 | M | M.SspZ69DndEP (100% identity) | M.Sen52030DndEP | |
| 9650 | DNA sulfur modification protein DndD | |||
| 9645 | DNA sulfur modification protein DndE | |||
| 9650 | M | M.SenS25DndDP (100% identity) | M.Sen52030DndDP | |
| 9655 | DNA phosphorothioation system sulfurtransferase | |||
| 9650 | DNA sulfur modification protein DndD | |||
| 9655 | M | M.SenS25DndCP (100% identity) | M.Sen52030DndCP | |
| 9660 | DNA sulfur modification protein DndB | |||
| 9655 | DNA phosphorothioation system sulfurtransferase | |||
| 9660 | M | M.SspZ69DndBP (100% identity) | M.Sen52030DndBP | |
| 9665 | 97 aa hypothetical protein | |||
| 9670 | malate transporter | |||
| 9675 | R | SenS25ORF20520P (100% identity) | Sen52030ORF9675P | |
| 9680 | YebC/PmpR family DNA-binding transcriptional | |||
| 14185 | Eaa protein | |||
| 14190 | M | M.Ssp15303ORFAP (100% identity) | M.Sen52030ORF14190P | |
| 14195 | ead/Ea22-like family protein | |||
| 20500 | drug/metabolite exporter YedA | |||
| 20505 | V | V.StyUK1DcmP (100% identity) | V.Sen52030DcmP | |
| 20510 | M | M.SenWDcmP (100% identity) | CCWGG | M.Sen52030DcmP |
| 20515 | phosphohydrolase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12010 | MFS transporter | |||
| 12015 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen52030ORF12015P |
| 12020 | R | SenS133ORF17655P (100% identity) | CAGAG | Sen52030ORF12015P |
| 12025 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9815 | type I restriction-modification system | |||
| 9820 | R | StyUK1MrrP (100% identity) | Sen52030MrrP | |
| 9825 | BrnT family toxin | |||