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Putative Salmonella enterica subsp. enterica serovar Heidelberg CVM N53023 RM systems
Ref: Tyson,G.H. et al. Antimicrob. Agents Chemother. (2020) In press
REBASE ref # 30787
Sequence length: | GenBank #: | |
Chromosome: | 4,821,913 bp | CP049310 |
plasmid pN53023: | 339,705 bp | CP049311 |
REBASE acronym: Sen53023
Org_num: 41498
All begin APM70_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
19940 | restriction endonuclease | |||
19945 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen53023ORF19950P |
19950 | M | M.Sens12373ORF19415P (100% identity) | GAGNNNNNNRTAYG | M.Sen53023ORF19950P |
19955 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen53023ORF19950P |
19960 | endoribonuclease SymE | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1880 | cell division protein DamX | |||
1885 | M | M.StyTDamP (100% identity) | GATC | M.Sen53023DamP |
1890 | ribulose-phosphate 3-epimerase | |||
2370 | DUF2556 family protein | |||
2375 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen53023ORF2375P |
2380 | DNA-binding transcriptional regulator Fis | |||
9220 | phosphohydrolase | |||
9225 | M | M.SenZ223DcmP (100% identity) | CCWGG | M.Sen53023DcmP |
9230 | V | V.StyTDcmP (100% identity) | V.Sen53023DcmP | |
9235 | drug/metabolite exporter YedA | |||
14305 | YqaJ viral recombinase family protein | |||
??? | M | M.SenS321ORF16155P (100% identity) | GATC | M.Sen53023ORF14310P |
14315 | DUF4060 family protein | |||
20080 | YebC/PmpR family DNA-binding transcriptional | |||
20085 | R | Sens12373ORF19550P (100% identity) | Sen53023ORF20085P | |
20090 | fosfomycin resistance glutathione transferase | |||
20110 | RM | Sens12373ORF19575P (100% identity) | GATCAG | Sen53023ORF20110P |
20115 | DEAD/DEAH box helicase | |||
plasmid pN53023 | ||||
23685 | 55 aa hypothetical protein | |||
23690 | M | M.Ssp15303DcmP (100% identity) | M.Sen53023Dcm2P | |
23695 | thermonuclease family protein | |||
24435 | 106 aa hypothetical protein | |||
24440 | M | M.Ssp15303ORFDP (100% identity) | M.Sen53023ORF24440P | |
24445 | 202 aa hypothetical protein | |||
24565 | DNA-binding protein | |||
24570 | M | M.Ssp15303ORFEP (100% identity) | M.Sen53023ORF24570P | |
24575 | 284 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
17375 | 33 aa hypothetical protein | |||
17380 | R | Sens12373ORF17180P (100% identity) | CAGAG | Sen53023ORF17385P |
17385 | M | M.SenZ223ORF2150P (100% identity) | CAGAG | M.Sen53023ORF17385P |
17390 | MFS transporter | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
19935 | BrnT family toxin | |||
19940 | R | StyUK1MrrP (100% identity) | Sen53023MrrP | |
19945 | type I restriction-modification system |