Salmonella enterica subsp. enterica serovar Johannesburg CVM N58011 |
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Putative Salmonella enterica subsp. enterica serovar Johannesburg CVM N58011 RM systems
Ref: Tyson,G.H. et al. Antimicrob. Agents Chemother. (2020) In press
REBASE ref # 30787
| Sequence length: | GenBank #: | |
| Chromosome: | 4,723,925 bp | CP049308 |
| plasmid p58011: | 310,495 bp | CP049309 |
REBASE acronym: Sen58011
Org_num: 41500
All begin A3Y33_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19835 | type IV toxin-antitoxin system YeeU family | |||
| 19840 | M | M1.SenSmo02ORF2465P (100% identity) | GNNTAYNNNNNRTGG | M.Sen58011ORF19840P |
| 19845 | S | S1.SenSmo02ORF2465P (98% identity) | GNNTAYNNNNNRTGG | S.Sen58011ORF19840P |
| 19850 | DUF262 domain-containing protein | |||
| 19855 | DUF262 domain-containing protein | |||
| 19860 | R | SenSmo02ORF2465P (100% identity) | GNNTAYNNNNNRTGG | Sen58011ORF19840P |
| 19865 | M48 family metallopeptidase | |||
| 19865 | M48 family metallopeptidase | |||
| 19870 | M | M.SenSmo02ORF2495P (100% identity) | M.Sen58011ORF19870P | |
| 19875 | S | S.SenSmo02ORF2495P (100% identity) | S.Sen58011ORF19870P | |
| 19880 | 62 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1690 | cell division protein DamX | |||
| 1695 | M | M.StyTDamP (100% identity) | GATC | M.Sen58011DamP |
| 1700 | ribulose-phosphate 3-epimerase | |||
| 2180 | DUF2556 family protein | |||
| 2185 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen58011ORF2185P |
| 2190 | DNA-binding transcriptional regulator Fis | |||
| 5490 | PerC family transcriptional regulator | |||
| 5495 | M | M.SenST203ORF14210P (100% identity) | M.Sen58011ORF5495P | |
| 5500 | RusA family crossover junction | |||
| 6970 | DUF550 domain-containing protein | |||
| 6975 | M | M.Sen9981ORF7135P (100% identity) | M.Sen58011ORF6975P | |
| 6980 | ead/Ea22-like family protein | |||
| 9125 | phosphohydrolase | |||
| 9130 | M | M.SenST203DcmP (100% identity) | CCWGG | M.Sen58011Dcm2P |
| 9135 | V | V.StyUK1DcmP (100% identity) | V.Sen58011Dcm2P | |
| 9140 | drug/metabolite exporter YedA | |||
| 9800 | DUF977 family protein | |||
| 9805 | M | M.EcoWI2ORF2503P (100% identity) | M.Sen58011ORF9805P | |
| 9810 | AAA family ATPase | |||
| 14525 | YqaJ viral recombinase family protein | |||
| 14530 | M | M.Sen71952ORF21600P (100% identity) | GATC | M.Sen58011ORF14530P |
| 14535 | DUF4060 family protein | |||
| 15140 | replication endonuclease | |||
| 15145 | M | M.SenST203ORF4380P (100% identity) | M.Sen58011ORF15145P | |
| 15150 | DUF2732 family protein | |||
| 19815 | YebC/PmpR family DNA-binding transcriptional | |||
| 19820 | R | Ssp8103ORF19015P (100% identity) | Sen58011ORF19820P | |
| 19825 | restriction endonuclease | |||
| 21895 | ogr/Delta-like zinc finger family protein | |||
| 21900 | M | M.SenST203ORF20920P (100% identity) | M.Sen58011ORF21900P | |
| 21905 | 66 aa hypothetical protein | |||
| 21910 | replication endonuclease | |||
| 21915 | M | M.SenST203ORF20905P (100% identity) | M1.Sen58011ORF21915P | |
| 21920 | 75 aa hypothetical protein | |||
| 21925 | M | M.SenST203ORF20895P (100% identity) | M2.Sen58011ORF21915P | |
| 21930 | 127 aa hypothetical protein | |||
| plasmid p58011 | ||||
| 23450 | 106 aa hypothetical protein | |||
| 23455 | M | M.Ssp15303ORFDP (100% identity) | M.Sen58011ORF23455P | |
| 23460 | 202 aa hypothetical protein | |||
| 23580 | DNA-binding protein | |||
| 23585 | M | M.Ssp15303ORFEP (100% identity) | M.Sen58011ORF23585P | |
| 23590 | 284 aa hypothetical protein | |||
| 24475 | IS6-like element IS26 family transposase | |||
| 24480 | M | M.YpsF1ORFCP (59% identity) | M.Sen58011ORF24480P | |
| 24485 | 55 aa hypothetical protein | |||
| 24570 | IS6-like element IS26 family transposase | |||
| 24575 | M | M.Ssp15303DcmP (40% identity) | M.Sen58011DcmP | |
| 24580 | thermonuclease family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17470 | 33 aa hypothetical protein | |||
| 17475 | R | Sens30601ORF17060P (100% identity) | CAGAG | Sen58011ORF17480P |
| 17480 | M | M.Sens679ORF16435P (100% identity) | CAGAG | M.Sen58011ORF17480P |
| 17485 | MFS transporter | |||