Escherichia coli AH25 |
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Putative Escherichia coli AH25 RM systems
Ref: Yin,D. unpublished
REBASE ref # 29305
| Sequence length: | GenBank #: | |
| Chromosome: | 5,146,159 bp | CP055256 |
| plasmid pAH25-2: | 116,030 bp | CP055258 |
REBASE acronym: EcoAH25
Org_num: 41465
All begin HUU84_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4240 | transposase | |||
| 4245 | R | SspZ54ORF5015P (96% identity) | EcoAH25ORF4245P | |
| 4250 | IS6-like element IS26 family transposase | |||
| 10600 | 388 aa hypothetical protein | |||
| 10605 | M | M.EcoVEF10ORF18030P (100% identity) | M.EcoAH25ORF10605P | |
| 10610 | S | S1.EcoVEF10ORF18030P (100% identity) | S.EcoAH25ORF10605P | |
| 10615 | YecA family protein | |||
| 10620 | cold shock domain-containing protein | |||
| 10625 | R | Eco194MORF9120P (100% identity) | EcoAH25ORF10605P | |
| 10630 | M48 family metallopeptidase | |||
| 15115 | GTPase family protein | |||
| 15120 | M | M.EcoCUVM53ORF965P (100% identity) | M.EcoAH25ORF15120P | |
| 15125 | IS1 family transposase | |||
| 15990 | GTPase family protein | |||
| 15995 | M | M.Eco1540ORF27595P (100% identity) | M.EcoAH25ORF15995P | |
| 16000 | S | S.SspS13ORF175P (100% identity) | S.EcoAH25ORF15995P | |
| 16005 | R | KpnLL83ORF1P (100% identity) | EcoAH25ORF15995P | |
| 16010 | IS5-like element ISKpn26 family transposase | |||
| 21055 | 128 aa hypothetical protein | |||
| 21060 | M | M.EcosC41ORF5210P (100% identity) | GCAGNNNNNTGT | M.EcoAH25ORF21060P |
| 21065 | S | S.EcosC41ORF5210P (98% identity) | GCAGNNNNNTGT | S.EcoAH25ORF21060P |
| 21070 | 428 aa hypothetical protein | |||
| plasmid pAH25-2 | ||||
| 25160 | type II toxin-antitoxin system Phd/YefM family | |||
| 25165 | M | M.Eco1540ORF27595P (100% identity) | M.EcoAH25ORF15995P | |
| 25170 | S | S.SspS13ORF175P (100% identity) | S.EcoAH25ORF15995P | |
| 25175 | R | KpnLL83ORF1P (100% identity) | EcoAH25ORF15995P | |
| 25180 | 3-phosphatase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1920 | cell division protein DamX | |||
| 1925 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoAH25DamP |
| 1930 | ribulose-phosphate 3-epimerase | |||
| 2475 | DUF2556 family protein | |||
| 2480 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoAH25ORF2480P |
| 2485 | DNA-binding transcriptional regulator Fis | |||
| 10260 | HD domain-containing protein | |||
| 10265 | M | M.SflN107DcmP (100% identity) | CCWGG | M.EcoAH25DcmP |
| 10270 | V | V.SflFF59DcmP (100% identity) | V.EcoAH25DcmP | |
| 10275 | drug/metabolite exporter YedA | |||
| 21035 | sialate O-acetylesterase | |||
| 21040 | R | EcosC41ORF5230P (100% identity) | EcoAH25ORF21040P | |
| 21045 | AAA family ATPase | |||
| 21410 | BREX-1 system phosphatase PglZ type A | |||
| 21415 | RM | EcoXJ52ORF19715P (100% identity) | EcoAH25ORF21415P | |
| 21420 | BREX system P-loop protein BrxC | |||
| plasmid pAH25-2 | ||||
| 25270 | tellurite/colicin resistance protein | |||
| 25285 | M | M.Eco1540ORF27460P (100% identity) | M.EcoAH25ORF25285P | |
| 25290 | recombination-associated protein RdgC | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21040 | HNH endonuclease | |||
| 21045 | R | SflN101McrBP (100% identity) | EcoAH25McrBP | |
| 21050 | R | Ecows53McrCP (100% identity) | EcoAH25McrCP | |
| 21055 | 128 aa hypothetical protein | |||