Vibrio cholerae SO5Y |
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Putative Vibrio cholerae SO5Y RM systems
Ref: Drebes Doerr,N.C. and Blokesch,M. unpublished
REBASE ref # 30771
Complete sequence: 2,947,270 bp
GenBank #: CP053800
REBASE acronym: VchSO5Y
Org_num: 41402
All begin HPY15_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 9855 | 1391 aa hypothetical protein | |||
| 9860 | S | S.Vch10432ORF1482P (100% identity) | S.VchSO5YORF9860P | |
| 9865 | PglZ domain-containing protein | |||
| 9955 | helix-turn-helix transcriptional regulator | |||
| 9960 | R | VmeZF102ORF9910P (98% identity) | VchSO5YORF9970P | |
| 9965 | S | S.Vme1015ORFAP (62% identity) | S.VchSO5YORF9970P | |
| 9970 | M | M.VchPS15ORF2542P (99% identity) | M.VchSO5YORF9970P | |
| 9975 | ATP-binding protein | |||
| 12990 | helix-turn-helix transcriptional regulator | |||
| 12995 | M | M.VchSa5YORF2649P (100% identity) | M.VchSO5YORF12995P | |
| 13000 | S | S.VchSa5YORF2649P (100% identity) | S.VchSO5YORF12995P | |
| 13005 | anticodon nuclease | |||
| 13010 | R | VchSa5YORF2649P (100% identity) | VchSO5YORF12995P | |
| 13015 | TIGR00645 family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1335 | AAA family ATPase | |||
| 1340 | M | M.VspNIH41DamP (100% identity) | GATC | M.VchSO5YDamP |
| 1345 | ribulose-phosphate 3-epimerase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5205 | sel1 repeat family protein | |||
| 5210 | R | VchVChf7McrCP (100% identity) | VchSO5YMcrCP | |
| 5215 | R | VchVChf7McrBP (93% identity) | VchSO5YMcrBP | |
| 5220 | 185 aa hypothetical protein | |||