Helicobacter suis NHP19-4022 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Helicobacter suis NHP19-4022 RM systems
Ref: Suzuki,M. and Rimbara,E. unpublished
REBASE ref # 30607
Complete sequence: 1,670,524 bp
GenBank #: AP023046
REBASE acronym: Hsu4022
Org_num: 40993
All begin NHP194022_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4600 | 3-deoxy-D-manno-octulosonate 8-phosphate | |||
| ??? | R | Hsu101cORF7690P (100% identity) | Hsu4022ORF4640P | |
| 4630 | S | S.Hsu0020ORF6320P (100% identity) | S.Hsu4022ORF4640P | |
| 4640 | M | M.Hsu101cORF7690P (99% identity) | M.Hsu4022ORF4640P | |
| 4650 | Outer membrane protein | |||
| 7830 | 82 aa hypothetical protein | |||
| 7840 | S | S.Hsu101cORF9840P (98% identity) | S.Hsu4022ORF7850P | |
| ??? | M | Hpy4004ORF11330P (100% identity) | M.Hsu4022ORF7850P | |
| 7870 | S-ribosylhomocysteine lyase LuxS | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1190 | 85 aa hypothetical protein | |||
| ??? | M | M.Hsu101cORF1200P (100% identity) | M.Hsu4022ORF1200P | |
| 1220 | 287 aa hypothetical protein | |||
| 1350 | selenocysteine-specific translation elongation | |||
| 1360 | M | M.HsuHS1ORF1490P (100% identity) | M.Hsu4022ORF1360P | |
| 1370 | 299 aa hypothetical protein | |||
| 1400 | Glucose-6-phosphate isomerase Pgi | |||
| 1410 | RM | Hpy4004ORF1390P (99% identity) | Hsu4022ORF1410P | |
| 1420 | 67 aa hypothetical protein | |||
| 2170 | 1-deoxy-D-xylulose-5-phosphate synthase Dxs | |||
| ??? | M | M.Hsu0020ORF2980P (100% identity) | M.Hsu4022ORF2180P | |
| 2200 | 640 aa hypothetical protein | |||
| 2240 | ABC transporter ATP-binding protein YheS | |||
| 2250 | R | Hsu0020ORF2900P (99% identity) | Hsu4022ORF2260P | |
| 2260 | M | M.Hsu101cORF2250P (99% identity) | M.Hsu4022ORF2260P | |
| 2270 | Phosphatidylglycerophosphatase A PgpA | |||
| 2840 | Bifunctional NAD(P)H-hydrate repair enzyme Nnr | |||
| 2850 | M | M.Hsu101cORF2840P (100% identity) | M.Hsu4022ORF2850P | |
| 2860 | R | Hsu101cORF2840P (99% identity) | Hsu4022ORF2850P | |
| 2870 | 256 aa hypothetical protein | |||
| 4030 | 39 aa hypothetical protein | |||
| 4040 | M | M.HsuHS1ORF4820P (100% identity) | M.Hsu4022ORF4040P | |
| 4050 | 467 aa hypothetical protein | |||
| 4330 | 239 aa hypothetical protein | |||
| 4340 | R | Hsu101cORF7400P (100% identity) | Hsu4022ORF4350P | |
| ??? | M | M.Hsu101ORFYP (100% identity) | M.Hsu4022ORF4350P | |
| 4360 | 154 aa hypothetical protein | |||
| 4490 | methyl-accepting chemotaxis sensory transducer | |||
| 4500 | RM | HsuHS1ORF9820P (100% identity) | Hsu4022ORF4500P | |
| 4510 | S | S.Hpy4004ORF4400P (97% identity) | S.Hsu4022ORF4500P | |
| 4520 | 68 aa hypothetical protein | |||
| 4910 | Shikimate kinase AroK | |||
| 4930 | M | M1.HsuHS1ORF9300P (100% identity) | M1.Hsu4022ORF4930P | |
| 4940 | M | M2.HsuHS1ORF9300P (100% identity) | M2.Hsu4022ORF4930P | |
| 4950 | R | HsuHS1ORF9300P (100% identity) | Hsu4022ORF4930P | |
| 4960 | Phosphotransacetylase | |||
| 9460 | Shikimate 5-dehydrogenase | |||
| 9470 | M | M.HsuHS1ORF7680P (100% identity) | M.Hsu4022ORF9470P | |
| ??? | R | Hsu0020ORF16410P (100% identity) | Hsu4022ORF9470P | |
| 9490 | DNA polymerase III subunit delta HolA | |||
| 11320 | 109 aa hypothetical protein | |||
| 11330 | M | M.Hsu0020ORF14580P (100% identity) | M.Hsu4022ORF11330P | |
| 11340 | NADPH dehydrogenase | |||
| 15940 | Fumarate hydratase FumC | |||
| 15950 | M | M.HsuHS1ORF3730P (100% identity) | M.Hsu4022ORF15950P | |
| 15960 | 193 aa hypothetical protein | |||
| 16440 | 766 aa hypothetical protein | |||
| ??? | M | M.Hsu0020ORF1570P (100% identity) | M.Hsu4022ORF16450P | |
| 16470 | 110 aa hypothetical protein | |||
| 16800 | 190 aa hypothetical protein | |||
| ??? | R | Hsu0020ORF17560P (100% identity) | Hsu4022ORF16820P | |
| 16820 | M | M.HsuHS1ORF18000P (100% identity) | M.Hsu4022ORF16820P | |
| 16830 | Molybdopterin-guanine dinucleotide biosynthesis | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1050 | HIT family protein | |||
| 1060 | M | M.Hpy4004ORF1060P (100% identity) | M.Hsu4022ORF1060P | |
| 1070 | 97 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8480 | 118 aa hypothetical protein | |||
| 8490 | R | Hsu0020McrBP (99% identity) | Hsu4022McrBP | |
| 8500 | R | HsuHS1McrCP (100% identity) | Hsu4022McrCP | |
| 8510 | Alginate_lyase domain-containing protein | |||