Escherichia coli LWY24 |
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Putative Escherichia coli LWY24 RM systems
Ref: Yuan,L. and Li,W. unpublished
REBASE ref # 30549
Complete sequence: 4,955,271 bp
GenBank #: CP054556
REBASE acronym: EcoLWY24
Org_num: 40715
All begin HT750_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 11645 | N-6 DNA methylase | |||
| 11650 | R | EcoWW2ORF20190P (100% identity) | CCCNNNNNGTG | EcoLWY24ORF11660P |
| 11655 | S | S.SflLIN11ORF19980P (100% identity) | CCCNNNNNGTG | S.EcoLWY24ORF11660P |
| 11660 | M | M2.SflLIN11ORF19980P (100% identity) | CCCNNNNNGTG | M2.EcoLWY24ORF11660P |
| 11665 | M | M1.EcoWW2ORF20190P (100% identity) | CCCNNNNNGTG | M1.EcoLWY24ORF11660P |
| 11670 | toll/interleukin-1 receptor domain-containing | |||
| 18395 | IS5-like element ISKpn26 family transposase | |||
| 18400 | R | EcoVEF5ORF6590P (99% identity) | AAAYNNNNNNCTC | EcoLWY24ORF18410P |
| 18405 | S | S.Sfl877II (100% identity) | AAAYNNNNNNCTC | S.EcoLWY24ORF18410P |
| 18410 | M | M.Eco668ORF3510P (100% identity) | AAAYNNNNNNCTC | M.EcoLWY24ORF18410P |
| 18415 | GTPase family protein | |||
| 19215 | transposase | |||
| 19220 | R | SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | EcoLWY24ORF19225P |
| 19225 | M | M.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | M.EcoLWY24ORF19225P |
| 19230 | S | S.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | S.EcoLWY24ORF19225P |
| 19235 | AAA family ATPase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5390 | drug/metabolite exporter YedA | |||
| 5395 | V | V.SsoSE61DcmP (100% identity) | V.EcoLWY24DcmP | |
| 5400 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.EcoLWY24DcmP |
| 5405 | phosphohydrolase | |||
| 8520 | DUF1317 family protein | |||
| 8525 | M | M.EfeC13ORF14690P (100% identity) | M.EcoLWY24ORF8525P | |
| 8530 | cell division protein ZapA | |||
| 16810 | cell division protein DamX | |||
| 16815 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoLWY24DamP |
| 16820 | ribulose-phosphate 3-epimerase | |||
| 17340 | DUF2556 family protein | |||
| 17345 | M | M.EspP079ORF3959P (100% identity) | ATGCAT | M.EcoLWY24ORF17345P |
| 17350 | DNA-binding transcriptional regulator Fis | |||
| 22360 | recombination protein NinB | |||
| 22365 | M | M.EcoS7380ORFIP (94% identity) | GATC | M.EcoLWY24ORF22365P |
| 22370 | NinE family protein | |||