Escherichia coli SCU-104 |
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Putative Escherichia coli SCU-104 RM systems
Ref: Stephens,C. et al. unpublished
REBASE ref # 30306
Complete sequence: 5,244,439 bp
GenBank #: CP053284
REBASE acronym: Eco6104
Org_num: 40374
All begin HHJ22_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 8100 | M48 family metallopeptidase | |||
| 8105 | R | PmeBin330ORFCP (100% identity) | GAGNNNNNGTTY | Eco6104ORF8125P |
| 8110 | macro domain-containing protein | |||
| 8115 | DUF4433 domain-containing protein | |||
| 8120 | S | S.EcosB2CORFEP (100% identity) | GAGNNNNNGTTY | S.Eco6104ORF8125P |
| 8125 | M | M.EcosB2CORFEP (100% identity) | GAGNNNNNGTTY | M.Eco6104ORF8125P |
| 8130 | transcription factor | |||
| 14625 | M48 family metallopeptidase | |||
| 14630 | R | EcoTX1999ORF2159P (100% identity) | Eco6104ORF14640P | |
| 14635 | S | S.EcoTX1999ORF2159P (100% identity) | S.Eco6104ORF14640P | |
| 14640 | M | M.EcoSTEC346ORFGP (100% identity) | M.Eco6104ORF14640P | |
| 14645 | 380 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1475 | cell division protein DamX | |||
| 1480 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco6104DamP |
| 1485 | ribulose-phosphate 3-epimerase | |||
| 2100 | DUF2556 family protein | |||
| 2105 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.Eco6104ORF2105P |
| 2110 | DNA-binding transcriptional regulator Fis | |||
| 5930 | cell division protein ZapA | |||
| 5935 | M | M.Sbo812ORFAP (100% identity) | M.Eco6104ORF5935P | |
| 5940 | DUF1317 family protein | |||
| 10410 | TrmB family transcriptional regulator | |||
| 10415 | M | M.EcoSTEC032ORF10825P (100% identity) | M.Eco6104ORF10415P | |
| 10430 | cell envelope integrity protein TolA | |||
| 14935 | drug/metabolite exporter YedA | |||
| 14940 | V | V.SflSTLE3DcmP (100% identity) | V.Eco6104DcmP | |
| 14945 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.Eco6104DcmP |
| 14950 | HD domain-containing protein | |||
| 16160 | NinE family protein | |||
| 16165 | M | M.EcoFHI72ORFBP (71% identity) | GATC | M.Eco6104ORF16165P |
| 16170 | recombination protein NinB | |||
| 17635 | DUF1737 domain-containing protein | |||
| 17640 | S | S.Eco39911ORFCP (100% identity) | S.Eco6104ORF17645P | |
| 17645 | RM | EcoG8ORF7130P (100% identity) | Eco6104ORF17645P | |
| 17650 | BcpO-related WXXGXW repeat protein | |||
| 17800 | regulator | |||
| 17805 | M | M.EcoSTEC1080ORF7640P (100% identity) | GATC | M.Eco6104ORF17805P |
| 17810 | DUF1382 family protein | |||