Escherichia coli SCU-121 |
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Putative Escherichia coli SCU-121 RM systems
Ref: Stephens,C. et al. unpublished
REBASE ref # 30306
| Sequence length: | GenBank #: | |
| Chromosome: | 4,952,079 bp | CP054328 |
| plasmid pSCU-121-1: | 68,450 bp | CP054329 |
REBASE acronym: EcoSCU121
Org_num: 40277
All begin HHJ34_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21855 | DUF262 domain-containing protein | |||
| 21860 | M | M.EcoZ247ORF19790P (99% identity) | M.EcoSCU121ORF21860P | |
| 21865 | S | S.EcoZ247ORF19790P (99% identity) | S.EcoSCU121ORF21860P | |
| 21870 | R | EcoW03ORF14320P (99% identity) | EcoSCU121ORF21860P | |
| 21875 | 238 aa hypothetical protein | |||
| 22420 | DUF600 family protein | |||
| 22425 | R | EcoW03ORF13795P (99% identity) | TGANNNNNNCTTT | EcoSCU121ORF22430P |
| 22430 | M | M.SspZ54ORF5015P (99% identity) | TGANNNNNNCTTT | M.EcoSCU121ORF22430P |
| 22435 | S | S.EcoW03ORF13795P (93% identity) | TGANNNNNNCTTT | S.EcoSCU121ORF22430P |
| 22440 | 523 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3365 | cell division protein DamX | |||
| 3370 | M | M.SspPIBDamP (99% identity) | GATC | M.EcoSCU121DamP |
| 3375 | ribulose-phosphate 3-epimerase | |||
| 3970 | DUF2556 family protein | |||
| 3975 | M | M.EcosalpORF2760P (100% identity) | ATGCAT | M.EcoSCU121ORF3975P |
| 3980 | DNA-binding transcriptional regulator Fis | |||
| 7000 | phage terminase large subunit | |||
| 7005 | M | M.EspP049ORF3912P (100% identity) | M.EcoSCU121ORF7005P | |
| 7010 | DUF1804 family protein | |||
| 11360 | phosphohydrolase | |||
| 11365 | M | M.EcoW03DcmP (100% identity) | CCWGG | M.EcoSCU121DcmP |
| 11370 | V | V.SflC32DcmP (74% identity) | V.EcoSCU121DcmP | |
| 11375 | drug/metabolite exporter YedA | |||
| 16400 | NinE family protein | |||
| 16405 | M | M.Ecocs03ORF11080P (74% identity) | GATC | M.EcoSCU121ORF16405P |
| 16410 | recombination protein NinB | |||
| 17365 | replication endonuclease | |||
| 17370 | M | M.EcoW03ORF18570P (100% identity) | GATC | M.EcoSCU121ORF17370P |
| 17375 | DUF3850 domain-containing protein | |||
| 22110 | HNH endonuclease | |||
| 22115 | R | EcoW03ORF14070P (100% identity) | EcoSCU121ORF22115P | |
| 22120 | 59 aa hypothetical protein | |||
| plasmid pSCU-121-1 | ||||
| 24090 | 97 aa hypothetical protein | |||
| 24095 | M | M.SensS499ORF26615P (100% identity) | M.EcoSCU121ORF24095P | |
| 24100 | 73 aa hypothetical protein | |||